Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03133 ATGCCTTTCTCTTTTGAGAGAAATTATTATGCTCAAGTTTTCTTCATATTTGGGAAGCTGAGTTCAAAAAAGAAGGAACAGTGGCGGATCACAAGAAGAAGAAGGAGGAACAGTGGCGGATCACAGGCGGCAGAACGGCAGTGCGGCAGTGCGAGGTGCGACGGGGCGGCGGTGCGGCTTCCCTTCCCTCCTCCTCCCCCCACCCCCCTCAACGGCGGCCCTGGCGGTGGTGACGCTCCCCTCGGTGGCTCACTCCCTCTCTCACGCTGTCTCTCTTCTCGGCTCAACTCTGATTCGCGACGGCACTCTCTCTCCCTCTTCCCTTTGATGACGACGATGACAAGCAAGGCAGCTAGGCATGGCGGCGGCGGCACTGGACACGGCCTCCCTCTCTTCCCTTCTCAGCTCTTCGTCACTCTCTCCCTCAAGCCCTCACCTGTGTTCCATTTTAATGGTGATTGGGGATTCGAACCACAACGCAAGTGCGTAGATACAAACATGGATACCTTCAATTTCGCATCTTTCGCACTTTCTGGTCCCTCCGGGATGCTGGGAAAACAGTTGAATTCCCCTCTACTTACTACAGATTCTGCAACACTGTTCTGCCATTACAAGGCTGATCTTTCTGCTGCTTCATCAAGTATTCCAAGTTTTCCAAAAGCAACATGGGCCTCAAATGTTTCCATGAAACATCGGATTTTACATTCAACTGCACAGATAGAAAATATAATCACTAGTGATGAAGATCAGAGTATGTGGGAAGCATCTAGACAAGCTCTTTCTGCATTTAACTTCAGCGATGAAGAGAAGGACAAGATACTTGGAAAAGCATTTGGCCTTGTTCATTCGCCTTATTGGGGAGAGGAACGTAAGACTGAAGTTCCCAAATATGAGACAGTAAATGCTGTATTAGACTACCTGAGGAGCTTAAATCTTTCTGAGGATGACATGTTCAAGTTGCTCAAAAAGTTTCCGGAGGTTCTTGGATGCAAGTTGGAGGAAGAATTGAAAGCTAATATAAAGATCCTGGACGAACAGTGGGGTATTAAAGGAAAATCTCTCAGGAACCTCCTCCTTCGAAATCCGAAGGTTTTGGGTTATAATGTTGATTGTAAAGGAGACTGCATGGCACAATGCACTAGATGCTGGGTTCGTTTCTAG 1161 0.4798 MPFSFERNYYAQVFFIFGKLSSKKKEQWRITRRRRRNSGGSQAAERQCGSARCDGAAVRLPFPPPPPTPLNGGPGGGDAPLGGSLPLSRCLSSRLNSDSRRHSLSLFPLMTTMTSKAARHGGGGTGHGLPLFPSQLFVTLSLKPSPVFHFNGDWGFEPQRKCVDTNMDTFNFASFALSGPSGMLGKQLNSPLLTTDSATLFCHYKADLSAASSSIPSFPKATWASNVSMKHRILHSTAQIENIITSDEDQSMWEASRQALSAFNFSDEEKDKILGKAFGLVHSPYWGEERKTEVPKYETVNAVLDYLRSLNLSEDDMFKLLKKFPEVLGCKLEEELKANIKILDEQWGIKGKSLRNLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03133 386 Pfam mTERF 298 368 IPR003690 GO:0003690|GO:0006355
Aip09g03133 386 MobiDBLite consensus disorder prediction 28 83 - -
Aip09g03133 386 Gene3D Transcription termination factor 3, mitochondrial 231 382 IPR038538 -
Aip09g03133 386 PANTHER CGI-12 PROTEIN-RELATED 182 385 IPR003690 GO:0003690|GO:0006355
Aip09g03133 386 MobiDBLite consensus disorder prediction 59 73 - -
Aip09g03133 386 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 182 385 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip09g03133 mTERF 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03133 - - aip:107619032 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03133 09 136568635 136574554 Aip09g03133 09 136568635 136574554 ECH