Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03122 ATGAGAGATCAAATGCTTAGACAAGATCATAGGAATCATGATAATAGAAACAAAGGAGGAGGAGGAGGAGGAAGCTTTGTTGTTCTTGGGAATAACAACAGCAATGGCCTCCCTTTGATCCATTTGCTTCTCTCAACCGCCACTGCCGTCGACGGTAACAACTTCGGCGCCGCCTTGAACAACCTCACCGACCTCTACCAGAGCGTTTCCCTAACCGGTGACTCAGTGGAGCGTGTTGTGGCCTATTTCTCTGATGGCTTAACCGCAAGGCTTCTCACAAGAAAGTCACCTTTCTATGACATGATCATGGAGGAACCAACTTCTGAGGAAGAGTTTCTTGCTTTCACTGATCTCTATAGAGTCTCTCCCTACTTCCAATTCGCTCATTTCACTGCCAATCAAGCAATCTTGGAGGCCTTCGAAAGGGAGGAAGATCGTAACAACCGTTCCATTCATGTCATCGATTTCGATGTCTCTTATGGCTTCCAGTGGCCTTCTCTGATACAATCGCTATCAGAGAAGGCCACTAGTACCAGCCGTATTTCCCTGAGGGTAACGGGATTCGGGAAGAATCTGAAGGAGCTGCAAGAAACGGAGTCAAGATTAGTGAGCTTCTCTAAGGGATTTAGCAACCTAGTGTTTGAGTTTCAAGGGCTTCTGAGAGGGTCAAGGGTGATAAACCTAAGGAAGAAGAAGAACGAAACGGTGGCAGTCAACTTGGTATCATACTTGAACACGTTGAGTTGTTTCATGAAGATCTCAGACACATTGGGCTTTGTGCATTCACTTAGCCCCTCCATTGTTGTCTTGGTTGAGCAAGAAGGTAGCAGGACCCCAACAAGGACATTCTTGTCAAGATTCACAGACTCGTTGCACTACTTTGCAGCCATGTTCGATTCTCTCGACGATTGTCTTCCGTTGGAGAGTGCTGAGAGGCTCAGGATTGAGAAGAAGCTTCTTGGGAAAGAGATCAAGAACATGCTCAACAACTATGAAAACAACAACATTGGTGATTGTGCTAAGTATGAGAGGATGGAGGCATGGAAGGCGAGGATGGAGAATCATGGTTTTGTTGGGAATAAGATTAGCTCCAAGGCCATGATTCAAGCCAAGCTACTTTTGAAGATGAGGACTCATTATTGTCCAATGCAGTTTGAAGAAGAAGATGACAGCGACGGCGGCGGCGGCGGTGGCGGTTTCAGGGTTTCGGAGAGAGATGAAGGAAGGGCTGTCTCTTTAGGGTGGCAAAATAGGTTTCTTCTTACTGTCTCAGCTTGGCAACCACTTTCTCTAATCTGA 1299 0.465 MRDQMLRQDHRNHDNRNKGGGGGGSFVVLGNNNSNGLPLIHLLLSTATAVDGNNFGAALNNLTDLYQSVSLTGDSVERVVAYFSDGLTARLLTRKSPFYDMIMEEPTSEEEFLAFTDLYRVSPYFQFAHFTANQAILEAFEREEDRNNRSIHVIDFDVSYGFQWPSLIQSLSEKATSTSRISLRVTGFGKNLKELQETESRLVSFSKGFSNLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFMKISDTLGFVHSLSPSIVVLVEQEGSRTPTRTFLSRFTDSLHYFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKNMLNNYENNNIGDCAKYERMEAWKARMENHGFVGNKISSKAMIQAKLLLKMRTHYCPMQFEEEDDSDGGGGGGGFRVSERDEGRAVSLGWQNRFLLTVSAWQPLSLI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03122 432 Pfam GRAS domain family 39 427 IPR005202 -
Aip09g03122 432 MobiDBLite consensus disorder prediction 1 25 - -
Aip09g03122 432 ProSiteProfiles GRAS family profile. 30 427 IPR005202 -
Aip09g03122 432 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 19 427 IPR005202 -
Aip09g03122 432 PANTHER OSJNBA0084A10.13 PROTEIN 19 427 - -
Aip09g03122 432 MobiDBLite consensus disorder prediction 1 17 - -
Aip09g03122 432 Coils Coil 310 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03122 Aip-Chr9 136468404 136469780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03122 47 430 GRAS Transcription Factor Family AT3G54220 34.351 5.53e-54 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip09g03122 GRAS 8.4e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03122 - - ahf:112776716 820.846