Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03120 ATGTCCGGCAATACTAATTGCACTGTTTACATAGGTAATCTGGATGAGAGGGTCACAGACAGAGTCTTGTATGATATTTTAATTCAAGCCGGACGAGTGGTAGATTTACATATTCCTAAAGATAAGGAATCAGAAAAACCGAAAGGCTTTGCCTTTGCAGAATATGAAACTGAGGAGATTGCGGATTATGCTGTCAAGCTTTTCTCAGGCCTTGTAACACTCTACAACAGAACACTGAAGTTTGCGATATCTGGGAGAGACAAAACCCCTAACGGTTCTGCTGGAGTTACACCAACATCAAATTCTTCTCAAAGATCAAGGCCTTATCCAGTGCCGTTTAATAACTCAGAATCTGATAAGCTATCAGCACATGACCGTTTTTCAGATTATGCAGCTCCTCGTCGCCGAGTAACTGACCTACCCAGTGGCCATGGATCTTACCACAGTGGCCATGATTTTGAGTCCAGCCGTAGAGCTTTTGGGGCAACATTGGATAGCATAAGTGGTTCTAGGTCTCGCCGCTAG 525 0.4381 MSGNTNCTVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEIADYAVKLFSGLVTLYNRTLKFAISGRDKTPNGSAGVTPTSNSSQRSRPYPVPFNNSESDKLSAHDRFSDYAAPRRRVTDLPSGHGSYHSGHDFESSRRAFGATLDSISGSRSRR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03120 174 MobiDBLite consensus disorder prediction 119 133 - -
Aip09g03120 174 Gene3D - 2 92 IPR012677 -
Aip09g03120 174 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 86 IPR000504 GO:0003723
Aip09g03120 174 MobiDBLite consensus disorder prediction 84 153 - -
Aip09g03120 174 SUPERFAMILY RNA-binding domain, RBD 4 84 IPR035979 GO:0003676
Aip09g03120 174 MobiDBLite consensus disorder prediction 90 118 - -
Aip09g03120 174 SMART rrm1_1 8 82 IPR000504 GO:0003723
Aip09g03120 174 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 80 IPR000504 GO:0003723
Aip09g03120 174 PANTHER OS01G0876500 PROTEIN 1 174 - -
Aip09g03120 174 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 1 174 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03120 8 89 Eukaryotic Initiation Factors Gene Family AT1G49760 29.268 6.87e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03120 K12831 - gmx:100784532 270.011