Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03103 atggaaaaggagaacggcgccatcccttgccgcgatcgaagctcgctgccgccgcgttgctccggtctgtcgcactgccactgtcgtccggggaagaccgccgccactgctaggAGACATCTCTCTGATTCTCATGCAAAGTTAAAGGAATTGGAGATGGGGAGGAAAGGGAGTTGGTTCTCTGCTGTGAAGAAAGTTTTTGGTTCTGAAAACAAAAAGGACCAGAAAACCCATAGTCATGGCCATAGCCATAGCAATAGTAAGTCCAAATTAGGATGTTTTGGACACCATGATCACAATGAAGCCGGAAATGAAGCGCAGGGAATAGTAGTTGTTCCGGCGCTTCCGCGTAAGAAAGAACCAAAACAAGCAAGAGTGGCAGGTCAGAATGAGCCGAACCAGCAGGCTTTCTCTTTGGTCTTGGCTACTGCTGTCGCAGCAGGTGCTGCTGTCGCGGCCGCGGCTGAGGCTACTCGTCCCAAGACTGTGACGCCTCGTCGCCGTGAAAAACTGAAGGATGATGAAGCAGCAATCATGATTCAGACAGCCTTCCGCGGATATCTGGCGAGGAAAAAACTGCGAGGCTTGAGAGGTTTGTCAAGGTTGAGAACATTGGTAAGAGGGCAATCTGTGAAAAGGCAATCAGCCTCTACCTTGCAATGCATGCAGACTCTTTCGAAACTGCAGTCTCAAGTTCGCGCGAGGAAGATCAGAATGTCTGAGGAGAACCAGGCTCTTCAGCGCCAGCTCCTGCAGAAACGGGAGAAGGAGCTTGAGAAGTTGCAAGCTGCTCAAGCTGAATGGGATCATAGAAAGGATTCAAAAGAGCAAGTTGAAGCAAAATTGTTGCACAGGCAAATTGCTACCATGAGAAGGGAGAAGGCTCTGGCTTATTCAATGACACATCAGCAAACTTGGAGGAACAATCTAAAATCAGGCACGAACGCCTCGTTTATGGATCCAAACAATCCTCACTGGGGCTGGAATTGGCTTGAGAGATGGATGGCTGTAAGGCCATGGGAGGGACAAAGCACATTCCAACACAATGAGCCTGCACCTCTAATTAGCACAGCCAGAAGCACGCTATCAGTTGGCGAAATAACCAAACTGTATACTCTACGCGACGATGCTAACATTAGCAAGAACTCCCCTAGGGCCATAAAAACAGGCCGGTCGCGCAGCGGCCTTAACTCGCCCTCAAATGTACTCACCCCATCAAAGTCCACAGCCTCTTTTACAGCTTCCCCCACTCCAAGGAGTCTCAGGGCAGCTAGTCCTAAACTTGGTTCCTGGGGTGGTGATGGAGACAAGAGGAATGCATTTGGCATTAGGAGGGAGGGCAACCGTAGGCACAGCATCGCCATTTCGCCTGCGAGGGATGATGAGCTCCTTAACTCACCTATGAACAGATCACCAAAGAAAGCAGCAGCAACAAAGGCCTCAAAATCCTTCAATATGGCAAAGAGCAGTGTTAGCTCATCTGAGAAATCAAGTCCTGCTACTGCAGCAAAGAAGAGACTCTCTTTGTCTCAATCTCCAACTTCAAATTCAAGAAGGCTTTCTACTCCAGGCAAGGTGGGGACAATTTCCAATAAGAGCAATGCTGCTGGTGCTACTATGAGAAAATCACCACCCCCAGCCCTCAACGCTCTCTCCTCTCTCGACTCTCTTTCTCAGTTTCTCGCCACTCTCTCCCACGAGTTCGAGCTCTCGTCAGCTCGTCTCATCTCCGGTCTCTCGCCTCTCGTATCTAGTCTGACAAGCTCTCGTCAGCTCAAGCACTCCCTTCCCTGCGCTCGCTTCGCCGGCGGCAGAAGCAGACAGAACTGGCATCTGGCCCCTCGGGTGGTAGTGGTCGTCGTCTTCTTGCTTCTCACTGTCTTGGTCTCGCACTTGGTCGTCGTTGTCGCTCTCTGTCGTCACCGTCTGGGCGCGCCTTCCCCGCTATCGTCGTCGCCGCGGGACTGGTCCTCATCGTCGCTCCCTGCCTCGTCATCGTCTCGCACTCAGACGCGCGACTTCCCTTCAACCTTCGTCGCCGGCAGCAGAGGCAGCAGGTCCCGGTTGGCTGGTCTTCGTTGTCGTCTTCTTGCTTCTCGCCTTGCCGTCAGCTTCTCCCTCGCCGTCAGCTTCCTTTGCGCAACCCGATTTGTTTCAATTGCTAAGAAAGTGAAGAAAGCTCTTCAGCCAGAGTGGCTTAAGTCTCTTCTGAAAAGGACTTTTTTTGAATCTTCCTGTGCAACTCATCCCCTGCTTAAGAAAGAGTTAAACCAATACTGCATAGCTGTACCGATTCAATTTGCCAAAATTGTGCATCTGGACCCAAACAGAACCCGCAATACATTCCCAAATTGCATAGAAACAGCGCAATATCTTTCTCTCCTAGCTTCGAAGATTAGAGAGTCCCACACCTACTGCTCAATTGGCAACAAGGTGACTAACAGGTTCATTTCTTGTGTTGCTGTGTTGATCCCGTCCATCGCTGCAATTGCGAACAATGATGTGGAGGTTACTAGATTCACTCAACTTCATCCTAAGCATGCCTCTCACCGTTACTACAACTTATCCCGTTTCAACCCCGCACAATCACAGGCTATTTCTAATCCCCCTCCCCAACAAAAACCTACACATACAGATGCACCAAATCATTATATTGGCCACAACGTTTCTAGGAAGGATAAAAACAAGTATCTTCTCTCTACTCTTCTTGATCTGAACGACACTAAGGAAGCGATTTATGGTGCCCTTGATGCGTGGGTTGCATGGGAGCAGAACTTCCCTATTGCCTCTTTGAAACTCATATTGAATGCTCTCGAGAAGCAACAACAGTGGCATAGGGTTGTTCAGGTGATTAAATGGATGCTGAGCAAGGGGCAGGGGAACACAATGGGAACATATGGTCAATTGATACGAGCTTTAGATATGGACCATAGAGTGGAAGAAGCGCACAAATTCTGGCAGACCAAAATCGACACTGATTTGCATTCGGTTCCCTGGCAGTTGTGTCATCTCATGATATCTGTATATTACCGAAACAACATGCTGGATGATCTTGTTCGGCTTTTCAAGGGATTGGAAGCTTTTGATCGTAAACCTCGAGATAAAACCATCATTAAGAAAGTAGCAAATGCATACGAGATGTTGGGCTTACATCAAGAGAAAGAGAGGGTACTGAAGAAATATAGCAATCTCTTCACAGAAGAAGGATCGATTAAGAAAGCTAGGAGGAACTCATCTGAGAAAAAATTAAAAAGTTTGAACATGGGGAAGGGAACAACCTTCCAAGGCAACCCAATGGGGCCAATGCTGGTGGAAAAACATGCTTCTACAATGGTCTTACACAGTTGTCATCTACACTTACTTCCCCATTTGTTTCAAGGAATGGGAAATCATACTTGTACCTGCTAA 3408 0.4654 MEKENGAIPCRDRSSLPPRCSGLSHCHCRPGKTAATARRHLSDSHAKLKELEMGRKGSWFSAVKKVFGSENKKDQKTHSHGHSHSNSKSKLGCFGHHDHNEAGNEAQGIVVVPALPRKKEPKQARVAGQNEPNQQAFSLVLATAVAAGAAVAAAAEATRPKTVTPRRREKLKDDEAAIMIQTAFRGYLARKKLRGLRGLSRLRTLVRGQSVKRQSASTLQCMQTLSKLQSQVRARKIRMSEENQALQRQLLQKREKELEKLQAAQAEWDHRKDSKEQVEAKLLHRQIATMRREKALAYSMTHQQTWRNNLKSGTNASFMDPNNPHWGWNWLERWMAVRPWEGQSTFQHNEPAPLISTARSTLSVGEITKLYTLRDDANISKNSPRAIKTGRSRSGLNSPSNVLTPSKSTASFTASPTPRSLRAASPKLGSWGGDGDKRNAFGIRREGNRRHSIAISPARDDELLNSPMNRSPKKAAATKASKSFNMAKSSVSSSEKSSPATAAKKRLSLSQSPTSNSRRLSTPGKVGTISNKSNAAGATMRKSPPPALNALSSLDSLSQFLATLSHEFELSSARLISGLSPLVSSLTSSRQLKHSLPCARFAGGRSRQNWHLAPRVVVVVVFLLLTVLVSHLVVVVALCRHRLGAPSPLSSSPRDWSSSSLPASSSSRTQTRDFPSTFVAGSRGSRSRLAGLRCRLLASRLAVSFSLAVSFLCATRFVSIAKKVKKALQPEWLKSLLKRTFFESSCATHPLLKKELNQYCIAVPIQFAKIVHLDPNRTRNTFPNCIETAQYLSLLASKIRESHTYCSIGNKVTNRFISCVAVLIPSIAAIANNDVEVTRFTQLHPKHASHRYYNLSRFNPAQSQAISNPPPQQKPTHTDAPNHYIGHNVSRKDKNKYLLSTLLDLNDTKEAIYGALDAWVAWEQNFPIASLKLILNALEKQQQWHRVVQVIKWMLSKGQGNTMGTYGQLIRALDMDHRVEEAHKFWQTKIDTDLHSVPWQLCHLMISVYYRNNMLDDLVRLFKGLEAFDRKPRDKTIIKKVANAYEMLGLHQEKERVLKKYSNLFTEEGSIKKARRNSSEKKLKSLNMGKGTTFQGNPMGPMLVEKHASTMVLHSCHLHLLPHLFQGMGNHTCTC 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03103 1135 MobiDBLite consensus disorder prediction 650 675 - -
Aip09g03103 1135 MobiDBLite consensus disorder prediction 863 888 - -
Aip09g03103 1135 MobiDBLite consensus disorder prediction 381 544 - -
Aip09g03103 1135 PANTHER IQ-DOMAIN 5-RELATED 53 536 - -
Aip09g03103 1135 Gene3D Tetratricopeptide repeat domain 914 1113 IPR011990 GO:0005515
Aip09g03103 1135 MobiDBLite consensus disorder prediction 476 538 - -
Aip09g03103 1135 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 53 536 - -
Aip09g03103 1135 MobiDBLite consensus disorder prediction 863 879 - -
Aip09g03103 1135 MobiDBLite consensus disorder prediction 438 457 - -
Aip09g03103 1135 MobiDBLite consensus disorder prediction 381 420 - -
Aip09g03103 1135 Coils Coil 236 271 - -
Aip09g03103 1135 MobiDBLite consensus disorder prediction 646 675 - -
Aip09g03103 1135 SMART iq_5 172 194 IPR000048 GO:0005515
Aip09g03103 1135 MobiDBLite consensus disorder prediction 70 99 - -
Aip09g03103 1135 Pfam IQ calmodulin-binding motif 175 194 IPR000048 GO:0005515
Aip09g03103 1135 MobiDBLite consensus disorder prediction 1 22 - -
Aip09g03103 1135 ProSiteProfiles IQ motif profile. 173 201 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03103 Aip-Chr9 136167826 136178863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03103 53 526 IQD Protein Family AT5G03040 40.125 1.16e-81 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03103 - - gmx:100807725 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03103 09 136167826 136178863 Aip09g03103 09 136167826 136178863 ECH