Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03099 ATGGGTAAAGAGAAGACTCACATCAACATTGTGGTCATTGGCCACGTCGACTCAGGAAAGTCGACCACCACCGGTCACTTGATCTACAAGTTGGGAGGTATTGACAAGCGTGTGATCGAAAGATTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCCTTCAAGTATGCCTGGGTGCTCGACAAGCTCAAGGCCGAGCGTGAAAGAGGTATCACCATCGATATTGCCTTGTGGAAGTTCGAGACCACCAAATACTACTGCACTGTCATTGATGCTCCCGGACACAGGGATTTCATCAAGAACATGATTACTGGAACTTCCCAGGCCGACTGTGCCGTTCTCATCATCGATTCCACCACTGGTGGTTTTGAAGCTGGTATCTCGAAGGATGGTCAGACCCGTGAGCACGCTCTCCTTGCTTTCACCCTTGGTGTCAAGCAGATGATTTGCTGTTGCAACAAGATGGATGCCACCACACCCAAGTACTCCAAGGCCCGTTATGATGAAATCGTGAAGGAAGTCTCATCCTACTTGAAGAAGGTCGGATACAACCCAGACAAAATCGCATTTGTTCCCATCTCTGGTTTTGAGGGAGACAACATGATTGAGAGGTCTACAAACCTCGACTGGTACAAGGGACCAACCCTTCTTGAGGCCCTTGACCAGATCAATGAGCCAAAGAGGCCATCAGACAAGCCCCTCCGTCTACCTCTTCAGGATGTGTACAAGATTGGAGGTATTGGAACTGTGCCAGTGGGACGTGTTGAGACAGGTGTCTTGAAGCCCGGTATGGTTGTGACCTTTGGACCTACTGGACTGACAACTGAAGTTAAGTCTGTTGAGATGCACCACGAAGCTCTTACAGAGGCCCTCCCCGGTGACAATGTTGGGTTCAACGTCAAGAATGTTGCAGTGAAGGATCTCAAGCGTGGTTTTGTTGCCTCAAACTCCAAGGATGACCCTGCCAAGGAGGCTGCTAACTTCACCTCCCAAGTCATCATCATGAACCACCCTGGCCAGATCGGAAATGGCTATGCGCCAGTGCTTGATTGCCACACCTCCCACATTGCTGTCAAGTTTGCTGAGCTCGTGACCAAGATTGACAGGCGATCTGGTAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAAGAATGGTGATGCAGGTCTTGTTAAGATGATTCCCACCAAGCCCATGGTTGTGGAAACCTTCTCTGAGTACCCACCTCTTGGTCGTTTTGCCGTCAGGGACATGCGTCAAACTGTGGCTGTGGGAGTTATCAAGAATGTGGAGAAGAAGGATGCTACCGGAGCCAAGCTTGAGTCACTTTGTAGGGAGTTACAACGTCAAAATAAAATGTTGATGGAAGAATGCAAACGTGTATCGACCGAGGGGCAAAACTTGAGGCTGGACCTTTCAGCCAAGTTTCAAGATGCAATCAAGGATGTGAGCAATAAGCTTGAAGAGCGAAAGGATGAGTGTCTTACTCAGCTTAAGGAAAATGACATGTTAAGAAACAAGCTAAAGCAGCTTGCTGATCAATATGAACTATCTGAACAGCAGTACGCCCAGAAGTTGAAGCAAAAGACATTGGAACTTCAGCTCGCTGATTTAAGAGTTAAGCAACACGAGGAAAAATTGGTTCAGGAACAGTCTCAGATTAAAGTATATGCAGAACAAGTGTCTCAGCTATTAGCAACAGAAAAGAATTTACGCATGCAGCTGACGACTGATGGGGAAAAATTCCAACAATTCCAGGAAGCCTTGTCAAAAAGCAATGAAGTTTTCGAAACATTTAAAAACGAAATTGAGAAGATGGCGAAATCAATCAAGGAACTCAAGAAGGAAAATCAATTCTTGAAGAGTAAATCTGAAAAGTCTGATATTACGCTTATAGAGTTAGTTGATGAGCGCGAGCGGTTGAAGAAACAACTGGAGAAAACAACGAAACAGAAGGAGAAGCTTGAGTCGTTATGCCGGTCGCTTCAGGCAGAAAGGAAGCAAAGTTCCTCTGAGAACAAAAGCAGCAACAATTCAGTTTCATCATGA 2046 0.4648 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDATGAKLESLCRELQRQNKMLMEECKRVSTEGQNLRLDLSAKFQDAIKDVSNKLEERKDECLTQLKENDMLRNKLKQLADQYELSEQQYAQKLKQKTLELQLADLRVKQHEEKLVQEQSQIKVYAEQVSQLLATEKNLRMQLTTDGEKFQQFQEALSKSNEVFETFKNEIEKMAKSIKELKKENQFLKSKSEKSDITLIELVDERERLKKQLEKTTKQKEKLESLCRSLQAERKQSSSENKSSNNSVSS 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03099 681 MobiDBLite consensus disorder prediction 646 681 - -
Aip09g03099 681 Coils Coil 630 671 - -
Aip09g03099 681 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 230 IPR000795 GO:0003924|GO:0005525
Aip09g03099 681 Coils Coil 595 622 - -
Aip09g03099 681 Coils Coil 500 559 - -
Aip09g03099 681 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 326 429 IPR009001 -
Aip09g03099 681 CDD EF1_alpha_II 230 320 - -
Aip09g03099 681 MobiDBLite consensus disorder prediction 646 660 - -
Aip09g03099 681 TIGRFAM EF-1_alpha: translation elongation factor EF-1, subunit alpha 1 433 IPR004539 GO:0003746|GO:0005525|GO:0006414
Aip09g03099 681 CDD EF1_alpha_III 323 426 - -
Aip09g03099 681 Pfam Elongation factor Tu GTP binding domain 5 222 IPR000795 GO:0003924|GO:0005525
Aip09g03099 681 MobiDBLite consensus disorder prediction 661 681 - -
Aip09g03099 681 PANTHER ELONGATION FACTOR 1-ALPHA-LIKE 1 439 - -
Aip09g03099 681 Gene3D Translation factors 229 316 - -
Aip09g03099 681 Pfam Elongation factor Tu domain 2 248 313 IPR004161 GO:0005525
Aip09g03099 681 Gene3D - 1 226 IPR027417 -
Aip09g03099 681 PANTHER TRANSLATION FACTOR 1 439 - -
Aip09g03099 681 Pfam Elongation factor Tu C-terminal domain 322 429 IPR004160 -
Aip09g03099 681 Pfam Myosin-like coiled-coil protein 430 664 IPR026183 GO:0019905
Aip09g03099 681 Hamap Elongation factor Tu [tuf]. 2 432 IPR004539 GO:0003746|GO:0005525|GO:0006414
Aip09g03099 681 Coils Coil 436 463 - -
Aip09g03099 681 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Aip09g03099 681 CDD EF1_alpha 9 227 - -
Aip09g03099 681 Gene3D Translation factors 323 430 - -
Aip09g03099 681 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Aip09g03099 681 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Aip09g03099 681 PRINTS GTP-binding elongation factor signature 148 157 IPR000795 GO:0003924|GO:0005525
Aip09g03099 681 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Aip09g03099 681 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Aip09g03099 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 249 IPR027417 -
Aip09g03099 681 SUPERFAMILY Translation proteins 231 321 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03099 Aip-Chr9 136025263 136061613 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03099 1 439 Eukaryotic Initiation Factors Gene Family AT5G60390 95.444 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03099 K03231 - gmx:100785429 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03099 09 136025263 136061613 Aip09g03099 09 136025263 136061613 ECH