Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03084 ATGTTGGATGCAAAGGGTTGTTGCAAGCTTAGGAGTTTTCCAGACCTTATGTTGCCTGCTCTCCAGCAACTCCGCGTTTCGTCTTGTTCAAGTCTTGAGAGTTTTCCAGAAATATTAGGGAAGATGGAAAGTTTAACAAAACTTGAGTTAGAATACACTCCAATAAAAGAATTCCCACCTTCAATTCGTTATATTACTAGGCTTGAAAGATTAGAATTGTGGCACTCTAAGATTGTTCTGTTGCCAAGTAGCATTTTTCTGATGAAAGAGCTTAAGTGCTTGAGAATTCGAAACTGTGATGGTTTGCTGTTACATTCACAAGAGAAAGTTGAGGAGCAAATAAGCTCAGTTGTGTTTTCCAATCAGCAACACTTTGATTTCAGAAACTGCAATGTATCAAATGAGTTTCTTCAAAGGAGTGTTCCTTGGTTAGTCAATGTGAAAGAGCTGAATCTATCATCCAACAGTTTCACAATTCTTCCTGCATGCATTGAAGGATGTACCTTCTTGAAGGTACTTATTTTGGATTATTGTGGGAATCTTCGAGAAGTCGGAGGGATTCCACCAAACATTGAAAAATTCTCTGCAAGAAGATGCATATTCTTAAAATTCTCTGTATGTGTTATTACCTGGAGCTGGAGGCGATGA 648 0.3827 MLDAKGCCKLRSFPDLMLPALQQLRVSSCSSLESFPEILGKMESLTKLELEYTPIKEFPPSIRYITRLERLELWHSKIVLLPSSIFLMKELKCLRIRNCDGLLLHSQEKVEEQISSVVFSNQQHFDFRNCNVSNEFLQRSVPWLVNVKELNLSSNSFTILPACIEGCTFLKVLILDYCGNLREVGGIPPNIEKFSARRCIFLKFSVCVITWSWRR 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03084 215 PANTHER NB-ARC DOMAIN PROTEIN 3 205 - -
Aip09g03084 215 SUPERFAMILY L domain-like 6 203 - -
Aip09g03084 215 Pfam Leucine Rich Repeat 146 167 IPR001611 GO:0005515
Aip09g03084 215 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 205 IPR044974 GO:0006952
Aip09g03084 215 Gene3D Ribonuclease Inhibitor 1 110 IPR032675 -
Aip09g03084 215 Gene3D Ribonuclease Inhibitor 111 212 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03084 Aip-Chr9 135637063 135637710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03084 2 99 WRKY Transcription Factor Family AT4G12020 38.000 2.50e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03084 - - ahf:112803708 399.438