Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03052 ATGCTCCAAAGGGGCTACGCGAAGCAGGTGAAGGAGGTTTGCAATATGTACATCCACGAAATGGAGCTACTTCAGATCGAGAAGAAGCTCGAGGACGAAGCTTGCAGAGAATCCCTTAGAGTTACCAATGAGGAGCGCAAGAAGCTCAAGGCCGAAGCTGCGCAGATTAGGGCTCCAGAGCGCAAGATCGCACAACAAGAATTCAGAGAAATACTCCTATTTGATGGTCACAATGGAACTGCTGCTGCTATTTATGCCAAGGAGAATCTTCTAAACAACATTTTAAGTGCAATTCCTTCAGATCTTAACAGAGATGAGTGGATAGCAGCATTGCCCAGGGCTTTGGTTGCAGGATTTGTGAAAACTGACAAAGATTTTCAACAGAAAGTACTTCTGGAATATTCTGAGTATTGCCAAATGAGCTTGCACATGCCCAATACCAGAAGTGGCCTTGGATTGTTGTCGTGGCATGTCAGCAGAGGCTGCAGCACCACAAATTGTGAATGCCAAAAACAACACCACCACCCTTTCTTTAACAAAACAAAGTTTGAATCTTTTCATGGTGGAGAAGCATTAGCAACCCTCACCTTCTATTACAGATTTCCAGGAAAAGGATTCTATCAAGGCAGCTGTGATTTGAAGTCTGAGGTGGTGGTCTTGAAGGCTGAGTTGGATAGAGTTAAGGGTTTGAATGTGGAGCTTGAATCCAAGAACAAGAAGCTCAGTGAGGATCTTGCTGCTGCTGAAGCTAAGATGGTAGTAGCTGTTGGTACCAGTGGCAAGGTATGA 789 0.4474 MLQRGYAKQVKEVCNMYIHEMELLQIEKKLEDEACRESLRVTNEERKKLKAEAAQIRAPERKIAQQEFREILLFDGHNGTAAAIYAKENLLNNILSAIPSDLNRDEWIAALPRALVAGFVKTDKDFQQKVLLEYSEYCQMSLHMPNTRSGLGLLSWHVSRGCSTTNCECQKQHHHPFFNKTKFESFHGGEALATLTFYYRFPGKGFYQGSCDLKSEVVVLKAELDRVKGLNVELESKNKKLSEDLAAAEAKMVVAVGTSGKV 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03052 262 Gene3D - 8 172 IPR036457 -
Aip09g03052 262 Coils Coil 220 251 - -
Aip09g03052 262 PANTHER ALPHABET, ISOFORM E-RELATED 71 130 - -
Aip09g03052 262 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 71 130 - -
Aip09g03052 262 SUPERFAMILY PP2C-like 65 133 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03052 Aip-Chr9 134781749 134783228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03052 68 129 PP2C-type Phosphatase Gene Family AT1G47380 82.258 3.05e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03052 - - aip:110266955 257.299