Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03038 ATGGAGATGGGAGAGAGTTGTTGGAGATGGAAGAGAGTGGTTGGAGATGGATTACTCGGAGACACAACAATGATTTCCAAATGTGGTTTTAAACTGGTTGCCACAGCCCTTTATATAGCGAAATCCATGCTCTATTTCACGGGAGGTGCACCTGAGTTGCTCCAATTCGTGTGGGGTGCAACTGAATTTGGGCCACCTCGCGTCTGGCATCCCGGTTATATGTCTcagAATAAAGATTTGAAGATCACGGTTATCTCTTCATTTCACACTACACTCTCGCGATTCCTCACTCATCCCTCTGAATGCTTCATCGGCGGCGCTATCAGCCGTGCACCGCCGTCTCACGGAACCTCCATTGCACTCTACTTCCATCGGCCTTGCTCGCATCACTCCCTTCTGTCGCACCCCTTCCCGGTTCTTCTTCGTCGCACCCCTTCCGTCGGCCTTGCTCGCATCGCTCCCTTTCGAACCCTAATGTTCCTGAATGCATTGACTAGTTTCATTTTTATTGCTGAGGAAGAGGAGGAGGAAGTAGAGATAGAGTATGTAGAAGGTTATGATGAACTTAAAGAGGAAGATGACATGGAGGATTTTGTTAATTTTAGATACATTTCAATTCTATTTTTATCTGGAATCTCTGAAGATGAAGAGGCAGAAGCAGCTGCTCAGAGAAGGGTGAAACAGAAGAATAAGTTAGCTTCAATAAAATCTGAGAAGGATTCTGTTGATCTTAAATCAAAGAAGGCAAAGGTCCTTGTTGAGAGTAAGAAGAGTCCTCAGGAGTTTGCAGAGCAAATTGTTGAAGAGGCACATAAAGGTATAATGAGTGTATGGGACAAAGCTGATATCATAAAGTGTATAGGACTCAATTGGAGGATTAGTCTTAGCATGAGTGATCCAAATCTTGTTCCACTTCTTATCCAGGGGGTAAAACGCATGAACCTGATTGCTCCTGCTGCAGCTTCATTAGTACTGGGGATAAAATCTGAGGCAGGAGATCTTGCTGTGCTTGTGCATGAACAGGGAGCTATGATTGATGATATTGGGTCCAACATTGAGCAGTCTCATGCAGCAACTGCACAAGCAAGATCGCAACTTGCTAAAGCTTCAAAGACTCAAAGATCAAATTCTTCTTTGGTAATATACATTGTGTAA 1155 0.4398 MEMGESCWRWKRVVGDGLLGDTTMISKCGFKLVATALYIAKSMLYFTGGAPELLQFVWGATEFGPPRVWHPGYMSQNKDLKITVISSFHTTLSRFLTHPSECFIGGAISRAPPSHGTSIALYFHRPCSHHSLLSHPFPVLLRRTPSVGLARIAPFRTLMFLNALTSFIFIAEEEEEEVEIEYVEGYDELKEEDDMEDFVNFRYISILFLSGISEDEEAEAAAQRRVKQKNKLASIKSEKDSVDLKSKKAKVLVESKKSPQEFAEQIVEEAHKGIMSVWDKADIIKCIGLNWRISLSMSDPNLVPLLIQGVKRMNLIAPAAASLVLGIKSEAGDLAVLVHEQGAMIDDIGSNIEQSHAATAQARSQLAKASKTQRSNSSLVIYIV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03038 384 Pfam SNARE domain 344 384 IPR000727 -
Aip09g03038 384 Coils Coil 218 238 - -
Aip09g03038 384 SUPERFAMILY SNARE fusion complex 332 374 - -
Aip09g03038 384 CDD SNARE_Qa 333 368 - -
Aip09g03038 384 Gene3D - 331 378 - -
Aip09g03038 384 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 333 369 IPR000727 -
Aip09g03038 384 PANTHER SYNTAXIN 333 381 IPR045242 -
Aip09g03038 384 PANTHER - 333 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03038 Aip-Chr9 134462071 134467912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03038 333 384 SNARE and Associated Proteins AT5G46860 61.538 6.15e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03038 - K08488 adu:110273574 241.891