Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03032 ATGGCATTCCATAGTGCAGTTGATGCGCACACTGCTGCTCATTTATTCAATGAATGTGTCATGACAGTTCTTAGGAAAAAAACAATCATTCTAGTGACTCATCAAGTGGAGCTTCTCTCAGAAGTTGATAAAATCCTAGTGATGGAGGGAGGGAAAATTACCCAGTCAGGAAGTGGTGGTTCAAATGCTAACAACCAATGGCGTGATTTCTTCAAGCTTCTCAAGAAAGGCTCAAGGATGCCATTTCAACCATTTCACCCTCTTAAGAAGAATGTTCCTAAGTTAACTAGAAGGAAGATCAACTGGGGCATACAAAGTTGCATCAAGACTGGCAAGTGCAATACCACCTCCTTCACATGTTCTAAGCCGTGGTATTGGCTGGCAGGGAATTGGAATACTGCTAAATGGACTTTTAGGAGCCGCAACTGGTTCATCAGTTTCTGTAGAGAATGTGGGACTCCTTGGAAGCACTCGCGTTGGAAGTTGAAGGGTCATTCAAATTTCAGCGGGCTTTATGATATTCTTCTCAATGTTAGGAAAATTTGGAGCTTTCTTTGCATCAATACCCTTACCTATTTTTGCAGCTGCACACTGCATTCTATTTGGTCTTGTAGGTGTTACTTGCATCAAATGTGGGAACCCGATGGACAAAGAACTGAAGATAATGGAACTTGTCCAGCTTGGCTACAAAGATTTCAACAATTTGACAGAAATTTATCAAAATGTTGGTCTGAAGGAGTTGCAGGAGTCAAGCAAAAATCATCATACATATCTCCTCTATTTTTTACTGGTGTGTTGGAGGCTGTGGTAGCTGCCTTGTTTATGAATATTTATATTGTTGGATTGAATCAATTGTCAGATATTGAAATAGACAAGGAACAATCAGGGTTTATGATCTTTATGTACTTCTTTGAAACTTACTTGGATATACGACAACTTAAGGCACTCAAACTTCCTACTCTTCCAAAGACTTTAGAAGGCGTTGGTGGCATAGTTGGTGCTCTTAGTGATTCTGTCACTGTCTTCCGTGAGAAGAACAAGATCACTATCACCTCTGATAGTAATTTCTCCAAGCGGATAAACTTGGAAATATGGAGAACAAGTAGCAGAAACAAGAGAAAGAGATTTATGGATTGCGGAATATCGTCAAGTTAa 1155 0.3991 MAFHSAVDAHTAAHLFNECVMTVLRKKTIILVTHQVELLSEVDKILVMEGGKITQSGSGGSNANNQWRDFFKLLKKGSRMPFQPFHPLKKNVPKLTRRKINWGIQSCIKTGKCNTTSFTCSKPWYWLAGNWNTAKWTFRSRNWFISFCRECGTPWKHSRWKLKGHSNFSGLYDILLNVRKIWSFLCINTLTYFCSCTLHSIWSCRCYLHQMWEPDGQRTEDNGTCPAWLQRFQQFDRNLSKCWSEGVAGVKQKSSYISPLFFTGVLEAVVAALFMNIYIVGLNQLSDIEIDKEQSGFMIFMYFFETYLDIRQLKALKLPTLPKTLEGVGGIVGALSDSVTVFREKNKITITSDSNFSKRINLEIWRTSSRNKRKRFMDCGISSS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03032 384 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 71 IPR027417 -
Aip09g03032 384 Gene3D - 4 79 IPR027417 -
Aip09g03032 384 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 4 57 - -
Aip09g03032 384 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 4 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03032 Aip-Chr9 134182969 134188477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03032 314 359 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 53.061 1.67e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03032 - - aip:107618764 284.648