Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03025 ATGACGAACCCTAATCTTTTTCCACCGTTCATCTCACGCCATTGTCCTTCACCTCACGTCGCTGCCAATTATTTCCTCGCTATCATTTATCCTCTCATCGCTTCTCATCTCCTCGCCGCTGCAAGAAACGCTATTGTTGCTTCCTTCATCGAGCTTCTATCTGGTTCTCGATCTGGCTTCGATCTGAATATTTGTTGCTGCCGCTTAATTCACCGCCATCGTTCATCTCCCTGCCGCTGCTCATCCCCTCGCGACACCTATCAACATCGTGCCGCTGCCTTCAATGAGCTTCTACGATCTTGTTCTGGCTTCGATCTGAAGCGAGCTTCTGTGATTTGGTGCCGCCTTCTCTGTAACTTCCGCGATTACGTCCTCGCTCTCACCGTCGAGAACTTCCTTGAGCACCGCCTCCAGACTTTCGTCTTCAAGTTCGGCGTGGCCAAGTCAATCCACCACGCCATGGTCCTCATTCGCCAGCGCCACATAGATGTGCTACTCCAGCTTCATCAAGATTTGCCAATAATAACAATAATGATGATGCACTAG 546 0.5018 MTNPNLFPPFISRHCPSPHVAANYFLAIIYPLIASHLLAAARNAIVASFIELLSGSRSGFDLNICCCRLIHRHRSSPCRCSSPRDTYQHRAAAFNELLRSCSGFDLKRASVIWCRLLCNFRDYVLALTVENFLEHRLQTFVFKFGVAKSIHHAMVLIRQRHIDVLLQLHQDLPIITIMMMH 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03025 181 Gene3D - 134 170 IPR036986 GO:0003723
Aip09g03025 181 PANTHER 30S 40S RIBOSOMAL PROTEIN 119 168 IPR022801 -
Aip09g03025 181 PANTHER 40S RIBOSOMAL PROTEIN S9-2-LIKE 119 168 - -
Aip09g03025 181 SUPERFAMILY Alpha-L RNA-binding motif 119 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03025 Aip-Chr9 134056441 134057241 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03025 122 168 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 82.979 6.42e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03025 K02997 - aip:107643557 196.052