Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02953 ATGGGTAAGCGAGAATCATCCGGATCACCTCAATGTAGCGAGAACAAGAGAGACACAAGAGAGGCTAGCATTAATGCTATTGATAACCAACTCTTACATTATCTGTACTTGAACCATATACCTCACATACCCCAATTTTTATCTTCTAGGTACCACGGTTTTTATACTGCTGCAGTATATTCTAACCAATATCCGACAACCATGCATCCATCACTATACAACATATTCCCACCATCATTTATTGTAGGTCCAACTGTCACAAATTTTCAGCCTCCTACTCTCTTATATCCTTTTCAATCTACTAATCCAAGAGATACAGATGAAATTCTTAAATTGCTAAAGTCTCCACAACATCATCAGTCTGACTCTGGTACAAATAAAAAGGGTTCTGAGAATGGTGACACTGTGAACTATGCAACTGTGGAGAAGATGAATGCACTTCTTGAGGGATTATTTGATGGCATCGAAAAAGCGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGGTGCAGTTGCTGGAGATGACGAGGGATCGCAGCTGTTATTGCTCAATGCTGCTGAGGAGTTCTGTTACAAAAAAGGTAGCAATGAGTTGAATGAGGTTGCACTTATTCTGAAAGCCCTCTATGATGTTGATTTGGTGGAGGAAGAGCACGTCGTGCATTGGTATTCAAAGGGATTGAAGGGTGATAAGAAGGACTCTCAAATATGGAAGAATGCTCAACCATTCATTGATTGGATTCGGAATGCTGAATCAGAATCGAAGGAAGAATGA 783 0.4036 MGKRESSGSPQCSENKRDTREASINAIDNQLLHYLYLNHIPHIPQFLSSRYHGFYTAAVYSNQYPTTMHPSLYNIFPPSFIVGPTVTNFQPPTLLYPFQSTNPRDTDEILKLLKSPQHHQSDSGTNKKGSENGDTVNYATVEKMNALLEGLFDGIEKAFGKEATKRKNHLAGAVAGDDEGSQLLLLNAAEEFCYKKGSNELNEVALILKALYDVDLVEEEHVVHWYSKGLKGDKKDSQIWKNAQPFIDWIRNAESESKEE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02953 260 Gene3D - 101 260 - -
Aip09g02953 260 MobiDBLite consensus disorder prediction 115 134 - -
Aip09g02953 260 CDD W2_eIF5 127 257 - -
Aip09g02953 260 ProSiteProfiles W2 domain profile. 99 260 IPR003307 GO:0005515
Aip09g02953 260 SMART 542_3 168 256 IPR003307 GO:0005515
Aip09g02953 260 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 135 260 - -
Aip09g02953 260 Pfam eIF4-gamma/eIF5/eIF2-epsilon 182 260 IPR003307 GO:0005515
Aip09g02953 260 MobiDBLite consensus disorder prediction 116 134 - -
Aip09g02953 260 SUPERFAMILY ARM repeat 136 254 IPR016024 -
Aip09g02953 260 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 135 260 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02953 Aip-Chr9 132173523 132177463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02953 144 253 Eukaryotic Initiation Factors Gene Family AT1G77840 54.054 1.41e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02953 K03262 - aip:107619007 239.58