Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02952 ATGGCTGAAGGATGTGGTGGGAACTCAGTTGCAACCACTTCTCCTGCTTCATTCAATTGGTGGTACCTCCATGCAAATCATGCTACTAATACTAACGCATATAATAATCATCATCATCACCAAACAAACCCTAATAATTCTTCATCATGTTCTTGTGAGGAGGATATATCTGTTTCAACATCTTTCACTAATGCCTCCAACCATTCAACCCTCACTGTTGATTCTTCCCGAAGGCTTCTTGATCCTTCCTCCAACAACAATCACTTCTTGCCGGAACATGCTGAGGATAATCATCTTTGGAATCATGTTCTATCAGCTGTTGGATCAAACGGGGAGTTGCACAACAATGAAGAAATGGGAGAAATGAAGTTTCTGGATGCACTATCATCTAAGAACATGACAAGCTCCATGTTTGAAGAACCGGCATGTGACTACTTGAAGAAACTTGACACCACTACTAGTTGGGAATATAGTGGTGGATCAACTTCTTCATCATTCAACAACAGTTTTGAGAAGCACTTGAATAATAATAATAATAATAATGGGTTCAGTGATGATGCATTGATTGAGAATAATGAAAGGTTGACTAAGTTATCTAATCTTGTTAGCACTTGGTCTATTGCCCCACCTGACCCTGAAGTTAGTAGTAGCCACTTTGATCATCCACCAACAAATAATAATCATCATCAATTCCCACAATCTCATCATCATCATGACCCTAATTGTAATTTCAAGCAACAAGTTTTTATTGGAGATTCCACATCATACCCTCCAATCAGTAGCTATGATCATCCCACAAAGGTGAAGGAAGAATTTCATCATCATCAAACAAATAGTGGATTTCAAAATGGATTAATTAATGGCCTTTCTTCAGTGATGGGAGGAGATAGTGGTAATAAATTTTACCATGGTTTGCCAAACCTTTCTTCATGCACAAGAAACATCTCAGATGTTATTTCCTTCAATAGTAGGCTTGGGAGGCCAGTTCTTGGAATCCATGCACAAAAGCCTAATATCAAATACATGAATAATTTATCTGAATCAAAGAAGCAGCAAGGTCTTCAAACAACACCCCCGATAAATAGAAGTAATAATGGAAGAGTAGAGGGGACAACAGCTCGTGAAGTAAAGAAGAAAAGATCTGAAGAATCTTCAGAAGCAATCTTGAAGAAGCCTAAGCAAGATACATCCACAGCTTCTTCTACAAAGGTGCAAGCACCCAAAGTCAAGCTGGGGGACAAGATCACAGCCCTTCAACAAATTGTGTCTCCATTTGGAAAGACAGACACAGCTTCGGTGCTGTTTGAAGCAATTGGGTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTAAGCAACCCTTACTTGAAGTCTAATTCCCACAAGGATCCATGGGGAAGCTTGGATAGAAAAGATCACCACAAGGAGGATGCAAAATTAGACCTTAGGACTAGAGGACTTTGTTTAGTTCCAACTTCATGTACTCCTCTTATTTACAGAGAGAACAGTGGACCAGATTATTGGACACCAGCATACAGAGGATGTTTGTATAGGTGA 1557 0.3931 MAEGCGGNSVATTSPASFNWWYLHANHATNTNAYNNHHHHQTNPNNSSSCSCEEDISVSTSFTNASNHSTLTVDSSRRLLDPSSNNNHFLPEHAEDNHLWNHVLSAVGSNGELHNNEEMGEMKFLDALSSKNMTSSMFEEPACDYLKKLDTTTSWEYSGGSTSSSFNNSFEKHLNNNNNNNGFSDDALIENNERLTKLSNLVSTWSIAPPDPEVSSSHFDHPPTNNNHHQFPQSHHHHDPNCNFKQQVFIGDSTSYPPISSYDHPTKVKEEFHHHQTNSGFQNGLINGLSSVMGGDSGNKFYHGLPNLSSCTRNISDVISFNSRLGRPVLGIHAQKPNIKYMNNLSESKKQQGLQTTPPINRSNNGRVEGTTAREVKKKRSEESSEAILKKPKQDTSTASSTKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKSNSHKDPWGSLDRKDHHKEDAKLDLRTRGLCLVPTSCTPLIYRENSGPDYWTPAYRGCLYR 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02952 518 MobiDBLite consensus disorder prediction 391 405 - -
Aip09g02952 518 MobiDBLite consensus disorder prediction 371 390 - -
Aip09g02952 518 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 395 444 IPR011598 GO:0046983
Aip09g02952 518 PANTHER TRANSCRIPTION FACTOR BHLH111 22 504 - -
Aip09g02952 518 MobiDBLite consensus disorder prediction 212 243 - -
Aip09g02952 518 MobiDBLite consensus disorder prediction 348 370 - -
Aip09g02952 518 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 410 460 IPR036638 GO:0046983
Aip09g02952 518 CDD bHLH_AtbHLH_like 410 452 IPR045239 -
Aip09g02952 518 Gene3D - 408 463 IPR036638 GO:0046983
Aip09g02952 518 MobiDBLite consensus disorder prediction 348 406 - -
Aip09g02952 518 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 22 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02952 Aip-Chr9 132139866 132143882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02952 17 518 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 33.463 5.48e-50 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02952 - - gmx:100527800 601.668