Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02945 ATGATGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATACCAAGTTCGGATAATAATAATAATAATAACAATGATGCCATTCATGATGAACACCGTCAACCAACAACAACAGCAGCAGCAGCAACAGCAACAAGATTTTCTATTCTTCAACAATCTTTGCGTCCTATTACCCTAAAATTTGAGGACGTATCATACAGCATAAGCTTCCCAAGGAAAAAGAAGAATGGCTGCTTCTTGCATCAAGAGCCAAAGCACAGAAGGAAAATACTCAGCAGCGTCACCGGCGTCGCTCGTCCCGGGGAGCTAACGGCAATGCTGGGGCCGTCCGGGAGCGGCAAGACAACTCTCTTGACCGCGCTCGCCGGTCGCCTCGACGGAAAAGTTTCCGGCTCCATAACTTACACCGGCCGCCACGACACCGCCGCCGTGAAGCGCAAGATAGGCTTCGTCTCCCAAGACGACGTACTCTACCCTCACCTGACCGTCCAAGAAACCCTAAATTACGCCGCCATGCTGAGGCTCCCGAAGACGCTCACCAAGGAAGAGAAGCTTCAGCATGCAGACGCGATTATCGCGGAACTCGGCCTCACGCGGTGCCGGAACAGTCCCGTCGGCGGCGGAGTGTCGATTATCCGGGGAATCTCCGGAGGAGAGAGGAAAAGAGTGAGTATAGGTCTTGAGATGCTGATAAACCCTAGTTTGTTGTTTCTCGACGAGCCTACGTCGGGGCTGGACTCCACGACGGCTCAGCTGATCATGTCGGTGGTGCGAGGGCTCGCCCGCGGCGGCCGGACGGTGGTGACGACGATTCACCAGCCGTCGAGCCGGCTTTACAGGATGTTTGATAAGGTGGTGGTGCTTAGCGACGGGCAGCCGATTTATTCCGGTCAATCGGGTCGGGTCATGGAGTATCTTGAATGCATCGGGTATGCGCCAGCTTTCAACTTCGTCAACCCTGCTGATTTCCTTCTTGACCTTGCAAATGGCATAGTTGCTGATGTCAAACATGACGATAATGTTGAACATCATGAGGATCAAGCATCAATCAAACAGTCCCTAATTTCATCCTACAAGAAGAACTTGTATCCTGCTCTTAAAGAAGAGATTCAACGAAATAATATTGACTCAGTAATATCATCAGGAACACCAAGAAGTTCTGATAATCAATGGAACACAACCTGGTGGGAGCAATTGAAGGTGTTACTTAAGAGGGGTTTACAAGAGAGAAGGCATGAATCCTTTTCTGGCCTTCGAATCTTCCAAGTTTTGTCTGTGTCCATTCTCTCAGGGCTTCTTTGGTGGCATTGTGATCACTCACACATACAAGATCAGGTTGGACTCCTTTTCTTCTTCTCAATTTTCTGGGGATTCTTCCCTCTCTTCAATGCTATCTTTGCATTTCCTCTGGAGAGGCCAATGCTTGTGAAAGAAAGATCATCAGGAATGTACCATCTGTCCTCATACTACGTGGCACGAATGCTTGGAGACTTGCCAATGGAGCTTGTCCTCCCTACAATCTTTGTAAGCATCAGCTACTGGATGGGAGGACTAAAGCCTTCAGTAGTGACATTTGTGCTAACCCTCTTGATCATGCTTTTCAATGTCCTTGTATCCCAAGGAATAGGCCTAGCACTCGGTGCAATCCTCATGGATGTGAAGCAAGCCACGACTCTAGCCTCAGTGACCATGCTGGTGTTTCTCTTGGCTGGTGGCTACTACATTCAACATATGCCGCCCTTCATAGAATGGTTGAAGTATGTCTCCTTCAGTCACTACTGCTATAAGCTCCTTGTAGGAGTTCAGTATCCAGAAAATGATGTGTATGATTGTGGACATGGCTTGCTTTGTAGAGTAAGAGACTTTCCTGCTATAAAGTGTTTGGGGATTGAAAATTTGTGGGAAGATGTTGCAACATTGACTCTGATGTTAATTGGATACAGAGTTGTCGCATATTTAGCTTTGAGGATGGGGCAGCCTCACTGA 1992 0.4744 MMPXXXXXXXXXXXXIPSSDNNNNNNNDAIHDEHRQPTTTAAAATATRFSILQQSLRPITLKFEDVSYSISFPRKKKNGCFLHQEPKHRRKILSSVTGVARPGELTAMLGPSGSGKTTLLTALAGRLDGKVSGSITYTGRHDTAAVKRKIGFVSQDDVLYPHLTVQETLNYAAMLRLPKTLTKEEKLQHADAIIAELGLTRCRNSPVGGGVSIIRGISGGERKRVSIGLEMLINPSLLFLDEPTSGLDSTTAQLIMSVVRGLARGGRTVVTTIHQPSSRLYRMFDKVVVLSDGQPIYSGQSGRVMEYLECIGYAPAFNFVNPADFLLDLANGIVADVKHDDNVEHHEDQASIKQSLISSYKKNLYPALKEEIQRNNIDSVISSGTPRSSDNQWNTTWWEQLKVLLKRGLQERRHESFSGLRIFQVLSVSILSGLLWWHCDHSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLVKERSSGMYHLSSYYVARMLGDLPMELVLPTIFVSISYWMGGLKPSVVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQHMPPFIEWLKYVSFSHYCYKLLVGVQYPENDVYDCGHGLLCRVRDFPAIKCLGIENLWEDVATLTLMLIGYRVVAYLALRMGQPH 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02945 663 Gene3D - 53 311 IPR027417 -
Aip09g02945 663 MobiDBLite consensus disorder prediction 1 41 - -
Aip09g02945 663 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 34 660 - -
Aip09g02945 663 Pfam ABC-2 type transporter 274 361 IPR043926 GO:0140359
Aip09g02945 663 Pfam ABC transporter 96 245 IPR003439 GO:0005524
Aip09g02945 663 CDD ABCG_EPDR 58 299 - -
Aip09g02945 663 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 317 IPR003439 GO:0005524
Aip09g02945 663 ProSitePatterns ABC transporters family signature. 217 231 IPR017871 GO:0005524
Aip09g02945 663 Pfam ABC-2 type transporter 399 605 IPR013525 GO:0016020|GO:0140359
Aip09g02945 663 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 34 660 - -
Aip09g02945 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 310 IPR027417 -
Aip09g02945 663 SMART AAA_5 102 294 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02945 Aip-Chr9 132009166 132013706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02945 100 306 Calmodulin-binding Proteins AT2G36910 25.352 1.21e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02945 K05681 - gmx:100792991 1014.6