Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02942 ATGGTGCACAAGATCCTCGAGGGAGGAAACATGAGAATCGAGCTGAGCAAAGAACTGCAGAGACATGCGAAAGTGGAAGCCAAGGTAATCTATGACAGGGAAAGTGGAAGATCAAGATGCTTTGGATTTGTGACTTACAGCAGCCTTGAAGAGGTCAACAGTGCTATTGAGTCCTTAGATGGCGCGTTATTTGTTCTTTTGTTCTTGAAAACATATGAAAAAGCTAATATTTCTGCATTTTCTTATTGCGACATGTATATACTTTTTTGTCCGGTTGTTCTATGGAATCATGAGCTTCCCTTGACATATGATTTCCACAATTATATGCTTAAAAGCATGGATGATGAATTTCGTGACATTGTTGGTGTTAGTGAAACTGAAGGTCGGTGGAATTCGTGGACATGTTCTTTGTGCAGTGGATAtgccaagtcttag 435 0.3885 MVHKILEGGNMRIELSKELQRHAKVEAKVIYDRESGRSRCFGFVTYSSLEEVNSAIESLDGALFVLLFLKTYEKANISAFSYCDMYILFCPVVLWNHELPLTYDFHNYMLKSMDDEFRDIVGVSETEGRWNSWTCSLCSGYAKS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02942 144 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 63 IPR000504 GO:0003723
Aip09g02942 144 PANTHER TRANSFORMER-2-RELATED 25 64 - -
Aip09g02942 144 Gene3D - 12 71 IPR012677 -
Aip09g02942 144 Pfam Mlo family 61 125 IPR004326 GO:0006952|GO:0016021
Aip09g02942 144 PANTHER 29 KDA RIBONUCLEOPROTEIN A, CHLOROPLASTIC-LIKE 25 64 - -
Aip09g02942 144 SUPERFAMILY RNA-binding domain, RBD 25 64 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02942 Aip-Chr9 131877836 131878496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02942 96 124 MLO family AT1G26700 68.966 2.19e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02942 - - ahf:112737665 120.168