Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02923 ATGAGTTCGGCTACAGATGCATGCATTAAGTCCTCGGCCTTTTGGTGGAACTTCCGGCGCCAGCGGCAACGTGCTAACAGAGTATCATCAAAGAAGAAGATAGGCTTAGGTTCCTTAGGGTGGGTCTCGAACTGGGTAGGGTTTTGGAGCGAATTGACATGGAATGTTACCTGCACATACTCACAATTTCTAGCAAGAAAGAACCCTGCTTGTTGTGTATATTTGTCATCCTTCTACAATGAAACTATTACCCCTTGTCCCTCTTGTGCATGTGGCTGCCAGAACAAAAGGAATTGTGTCAAGAGTGACTCTAAAATTCTGAGCATGGTTGGTGTTCACACTCCACAGAAAGACAATGAACCATTGATGCAGTGCACTCATCACATGTGTCCAATAAGGGTGCATTGGCATGTGAAGCAAAACTATAAGGACTATTGGCGAGTCAAGATTGCCATAACAAATTTCAATTACAGGATGAACTATTCCCTCTGGACTCTTGCAATTCAGCATCCAAATCTCAACAATGTCACACAAGTTTTTAGCTTTGATTACAAGCCTATACTTCCCTATGCTTCCATAAGTGAGTAG 588 0.4303 MSSATDACIKSSAFWWNFRRQRQRANRVSSKKKIGLGSLGWVSNWVGFWSELTWNVTCTYSQFLARKNPACCVYLSSFYNETITPCPSCACGCQNKRNCVKSDSKILSMVGVHTPQKDNEPLMQCTHHMCPIRVHWHVKQNYKDYWRVKIAITNFNYRMNYSLWTLAIQHPNLNNVTQVFSFDYKPILPYASISE 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02923 195 PANTHER COBRA-LIKE PROTEIN 52 194 - -
Aip09g02923 195 PANTHER PROTEIN COBRA 52 194 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02923 Aip-Chr9 131620697 131623351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02923 52 195 COBRA Gene Family AT5G15630 81.944 2.34e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02923 - - aip:107616467 316.62