Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02910 ATGCTTGTCACTTTGGTGGCACAAGAGTGGCCTGGATTACCAAAAGGTGTGAAATTTGATCCATCTGATCAAGAAATAATATCGCACTTGCTTGCAAAAGTTGGTGCAGCAGGTTCAGAGCCTCACCCTTTCATTGATGAATTTATTGCTACTCTTGAAGTGGATGATGGAATTTGTTATACACATCCTAAACATTTACCAGGTGTCAAGCAAGATGGTAGTGCTACACACTTTTTCCACAGATCAATCAAGGCTTATAATACCGGCAATCGAAAGCGTCGGAAAATAAATGACCAGGACTCTGGCGATGTCCGTTGGCACAAGACTGGAAAAACTAAACCTGTCGTCTCGGACGGGGTTCAGAGAGGCTGTAAAAAGATTATGGTTCTATATATGACTTCAGTTAGAGGAGTAAAAGCTGAGAAAACTAACTGGGTTATGCATCAATATCACCTCGGGACAGACGAAGATGAAAAGGAAGGAGAGTATGTTATCTCTAAAGTGTTTTACCAGCAACAAGTTAAGTTTGGTGAAAAAGATGATCATGATGTTCCTGGAACCAATGAAGCAACTGTTGTGAAAGATGATCCAGTCACTTCCAAATCTCTGACTTCGGAACCTCCTCATAGTGAAAAGCAATGTTCAGATCTCGACATAGGAGAAAAAACACATCAGATTCTTCAGGGTCCTCAGACAGATTGTGTAGAAGACATTCAAGTCGAGTGTGAAGAGATTGTAAAAACTGATGTATCCATGGCAGATGCTCAAAATAATGAAGGAATGGATAATGTAGAAAATAATGCTGACGGAGAACAAAAATGGTGGGACAGTGAGTCACAGAATTTGTTAGATTCACAACAACTTGTTGAAGCATTGGCCTTGTGTGATGATCTCCTCCATAGCCAGTGTTCCAATAAGGATGATGAAAATGAAGAACACAAGGAGCACTTGAGTCTTTCCATCTATGCTCATCTAGGACCAGAGCATCTGAAGAAAGATCTTGAAGAGTGCCAAAACCTTACTCTTGATCCTGCAAACGTAGAGCTCGAGACACCACCTTCAGAGTTTCGACTAAGTCAGCTGGAATTCGGTTCACAGGATAGCTTTGTTTCCTTTAGCGGCGGCAAGGCAGTCGATTAA 1140 0.4149 MLVTLVAQEWPGLPKGVKFDPSDQEIISHLLAKVGAAGSEPHPFIDEFIATLEVDDGICYTHPKHLPGVKQDGSATHFFHRSIKAYNTGNRKRRKINDQDSGDVRWHKTGKTKPVVSDGVQRGCKKIMVLYMTSVRGVKAEKTNWVMHQYHLGTDEDEKEGEYVISKVFYQQQVKFGEKDDHDVPGTNEATVVKDDPVTSKSLTSEPPHSEKQCSDLDIGEKTHQILQGPQTDCVEDIQVECEEIVKTDVSMADAQNNEGMDNVENNADGEQKWWDSESQNLLDSQQLVEALALCDDLLHSQCSNKDDENEEHKEHLSLSIYAHLGPEHLKKDLEECQNLTLDPANVELETPPSEFRLSQLEFGSQDSFVSFSGGKAVD 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02910 379 ProSiteProfiles NAC domain profile. 13 171 IPR003441 GO:0003677|GO:0006355
Aip09g02910 379 Gene3D NAC domain 22 175 IPR036093 GO:0003677|GO:0006355
Aip09g02910 379 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 6 372 - -
Aip09g02910 379 MobiDBLite consensus disorder prediction 193 210 - -
Aip09g02910 379 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 6 372 IPR044799 GO:0003700
Aip09g02910 379 Pfam No apical meristem (NAM) protein 14 152 IPR003441 GO:0003677|GO:0006355
Aip09g02910 379 MobiDBLite consensus disorder prediction 179 216 - -
Aip09g02910 379 SUPERFAMILY NAC domain 4 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02910 Aip-Chr9 131181443 131183713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02910 8 175 NAC Transcription Factor Family AT1G28470 61.538 1.59e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip09g02910 NAM 3.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02910 - - gmx:100787702 575.474