Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02905 ATGAACGGACACAATTCGGAGTGTTCGGAGCAGACAACGTCAACCGACAACGGTCCTGTCTTGGAGGAGTTCATCCCAATTAAGAAGAGACCATCATCTCCACATGAAGAAGAAGAAGATGATGATGACGATGAACAACATTCCCATCATCATCGCCACAAGATCTCGAAGGATAACACTGATAAGAGGAAATCAGATTGGCTTAGATCCGTTCAGTTGTGGAATAATCCAGAACCCTCATCACCACCTCATCAGGAGGTGAACAATAAGAAAGGCGGTGCGGTGGAAGTGAAGAGAAGTGGAAGTGGTGGTGCTTTTCAGCCATTTCACAAGGAGAAGGAGGAAAGAGTAGGTGGTGGTGGCGCCAAGGCAATTGCAAGTGATGATCTGAGACCACCGTGTTCCTCCAACAGCAGCAAGAAGGAAGAGAAAGAGGGGCAGAGGAAGCAGCGCCGTTGCTGGTCTCAGGAGTTGCACAAACGATTCTTGCAAGCCCTTCAACAACTTGGAGGCCCTGATTCTGCCACACCGAAGCAAATCAGGGAGCTTATGAAAGTTGATGGCCTCACTAATGACGAAGTCAAAAGCCATTTACAGAAATACCGGTTACACACTAGAAGACCTAGTGGCATAGTTCACAACAATGGCAATCCACAAACGACGCCGTTTGTCCTAGTAGGCAACATTTTTGTTCAACCGCCAGAATACGCAGCGGCCGTGGCCACGTCAGCAGATCTGGCACCTGCCGGAATATATGCGCCTGTAGCCACGCATCCTCCTCCACCTCCTCCCCGGACGGCGGCTGGTTCCACTAGAAGACCGCAGTTGAAGAAATCATCAAATCACATGCGTGAGGATCATCATCATTCACACTCGGAAGAAGATAGGGTTAATCATTCAAACTCTCCAGCTTCATCATCATCCACACACACCACCACAACTACTTCCCCTGCCTATTGA 960 0.4906 MNGHNSECSEQTTSTDNGPVLEEFIPIKKRPSSPHEEEEDDDDDEQHSHHHRHKISKDNTDKRKSDWLRSVQLWNNPEPSSPPHQEVNNKKGGAVEVKRSGSGGAFQPFHKEKEERVGGGGAKAIASDDLRPPCSSNSSKKEEKEGQRKQRRCWSQELHKRFLQALQQLGGPDSATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSGIVHNNGNPQTTPFVLVGNIFVQPPEYAAAVATSADLAPAGIYAPVATHPPPPPPRTAAGSTRRPQLKKSSNHMREDHHHSHSEEDRVNHSNSPASSSSTHTTTTTSPAY 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02905 319 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 5 314 IPR044787 GO:0003700|GO:0006355
Aip09g02905 319 SUPERFAMILY Homeodomain-like 147 207 IPR009057 -
Aip09g02905 319 MobiDBLite consensus disorder prediction 254 268 - -
Aip09g02905 319 Pfam Myb-like DNA-binding domain 151 202 IPR001005 -
Aip09g02905 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 206 IPR017930 -
Aip09g02905 319 MobiDBLite consensus disorder prediction 1 152 - -
Aip09g02905 319 MobiDBLite consensus disorder prediction 1 19 - -
Aip09g02905 319 MobiDBLite consensus disorder prediction 69 87 - -
Aip09g02905 319 MobiDBLite consensus disorder prediction 278 298 - -
Aip09g02905 319 Gene3D - 148 206 - -
Aip09g02905 319 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 314 - -
Aip09g02905 319 MobiDBLite consensus disorder prediction 135 152 - -
Aip09g02905 319 MobiDBLite consensus disorder prediction 253 319 - -
Aip09g02905 319 MobiDBLite consensus disorder prediction 299 319 - -
Aip09g02905 319 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 149 204 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02905 Aip-Chr9 130979320 130981294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02905 7 261 G2-like Transcription Factor Family AT1G68670 45.017 2.13e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip09g02905 Myb_DNA-binding 3.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02905 - - adu:107468029 530.406