Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02859 ATGGCTGACCCTTACGGCCTCCCAGAGGATCTCCGGCGACTCATGTCCAACAGACCCCACTTCACCACTGCCACCGCCGCCGCTCCTTTCTTTCCTCTTCCGGAGAACCCACTCTCTCTCCACCACCACCACCACCTCCTCAATGCTCCTCCTCCACCACCGCCTCTCAACACCACCTACGACCCCATCATCATCAACAACGTCGTCGGCGACCTTTTCTTTCCTCGTTCTAATAACAACAACACCAGCGCCGCCTTCACCGCTCATCATCATCACTTCCCTCTCCATCACCACCACCACAACTCCACCAACAATTCCCCGTCTTCTTCTTCTCTCAACCCCACACCCCCGCCACCTCCTCCTCCTCCTACTACTTCTGTCTCAGATCATCATCATCATGCATTCATGGCCGCCATGGACACTGCTTCTGCTGCTGCTGCTGCATCCATGGACAAAGGATGGCTGGCCTTCGACACCGGCACCAACCGCTGGCCTCGGCAGGAGACTCTCTCCCTTCTTGAGATCAGATCTCGTCTTGATTCCAAGTTCAGAGAAAATAATCAAAAAGCTCCCTTGTGGAATGAGATTTCTAGGATAATGGCTGAGGAATTTGGGTACCAAAGGAGTGGGAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACCAAGGAGGGAAAAGCTAGTAGACAAGATGGGAAACACTACAGATTCTTCAGGCAACTTGAAGCTATATGTGGTGGCGGCGGCGGCAGCGGCGGAAGTGGTGGAGATTCATCAAACACTACTCATAATAATAATCTTCATGCCTTAGCTTCAAACACTGCTTCAGCTTCTGTTGCTGGTGCTAATGTTCAAACCCCAATAAGCTTCAATAATGGTGATCATCATAACAATAATAGCTTGATCAAGTGTTCAGAGAGCTTGAGTTTTTCGAACTCGTGTGAACTGGAGACATCGTCATCTGAGAACAATGATGAGGATCTTTCAGCCATTGCATACATGATGAAGCACTCCACATCTTCAAGGGACAACAATAATAACAAGCAGAAAGGGGTGCAATTGGATGATGATCATCATGGGGGAAGGGTGAGAAGAAGAAGAAGCTTGAGGGCAAAAGTGGAAGAGATAGTTGGTTCCCACATGAGGAAGATCATCGAGACACAAGATGCATGGATGGAGAGAATGGTGAGTGTTGTTGAGCAAAGGGAAAAGGAGATGGCATCCATGGAGGAAGAGAGGAAGAAGAAAGAGTCAATGAGGTTTGACCAAGAAGTAACCGAGCTTTGGGCAAAAGAGAGAGCTTGGGTTGAAGCAAGGGATGCTGCATTGATAGAAGTTGTAAGAAAACACATTGGAAATGGAAACAATAATATCAACAATAATAAAGAGTTTGAGATTATTGAAGCATTGGCACCTCAAAGCAATAACAAGAACAACAAGGGCCAAACTGCAAATAATAACAACAATAATGGTGGTGGTGGTGGGAGGTGGAGTGAAATGGAGATATCAAACTTGATACAGTTGAGGACAGGGTTTGAAGAGAGAATGAGGGAGAATAATAATAATAATAATGGTGGAGGAGGGTATTATTTTGAGAGTAATAATAATAATAATAATAATAATGGGGTAAGTAGTGTTTGGGAAGAGATCTCAGGAAAATTGGGATGTTTGGGATTTGAGAGAAGTTCAGAAGAGTGTAAGCAGATTTGGGATGAGATCAGCATCTCACTTGGGAGGACAAATACTTCTGCTGCTGCTGCTGTTGCCAAAACCAATAGGCCTTGGTGTTTGGAACTCAAGCTCACTGATGATGATGATGATGATGATGAACATCATCATGATCATGATGATCATCACATTTGA 1878 0.4526 MADPYGLPEDLRRLMSNRPHFTTATAAAPFFPLPENPLSLHHHHHLLNAPPPPPPLNTTYDPIIINNVVGDLFFPRSNNNNTSAAFTAHHHHFPLHHHHHNSTNNSPSSSSLNPTPPPPPPPPTTSVSDHHHHAFMAAMDTASAAAAASMDKGWLAFDTGTNRWPRQETLSLLEIRSRLDSKFRENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGGGGGSGGSGGDSSNTTHNNNLHALASNTASASVAGANVQTPISFNNGDHHNNNSLIKCSESLSFSNSCELETSSSENNDEDLSAIAYMMKHSTSSRDNNNNKQKGVQLDDDHHGGRVRRRRSLRAKVEEIVGSHMRKIIETQDAWMERMVSVVEQREKEMASMEEERKKKESMRFDQEVTELWAKERAWVEARDAALIEVVRKHIGNGNNNINNNKEFEIIEALAPQSNNKNNKGQTANNNNNNGGGGGRWSEMEISNLIQLRTGFEERMRENNNNNNGGGGYYFESNNNNNNNNGVSSVWEEISGKLGCLGFERSSEECKQIWDEISISLGRTNTSAAAAVAKTNRPWCLELKLTDDDDDDDEHHHDHDDHHI 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02859 625 CDD GT1 162 228 - -
Aip09g02859 625 MobiDBLite consensus disorder prediction 479 503 - -
Aip09g02859 625 SMART sant 498 581 IPR001005 -
Aip09g02859 625 SMART sant 160 223 IPR001005 -
Aip09g02859 625 Coils Coil 397 424 - -
Aip09g02859 625 PANTHER - 72 587 - -
Aip09g02859 625 MobiDBLite consensus disorder prediction 479 499 - -
Aip09g02859 625 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL-LIKE 72 587 - -
Aip09g02859 625 MobiDBLite consensus disorder prediction 95 129 - -
Aip09g02859 625 ProSiteProfiles Myb-like domain profile. 162 221 IPR001005 -
Aip09g02859 625 MobiDBLite consensus disorder prediction 354 372 - -
Aip09g02859 625 Gene3D - 164 226 - -
Aip09g02859 625 Gene3D - 502 581 - -
Aip09g02859 625 Pfam Myb/SANT-like DNA-binding domain 162 249 IPR044822 -
Aip09g02859 625 MobiDBLite consensus disorder prediction 344 372 - -
Aip09g02859 625 MobiDBLite consensus disorder prediction 111 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02859 Aip-Chr9 129824985 129827921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02859 163 579 Trihelix Transcription Factor Family AT5G03680 40.639 2.30e-82 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aip09g02859 Myb_DNA-bind_4 5.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02859 - - ahf:112711553 823.157