Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02836 ATGCTCTTAAGATGGGTTAGAGAGGATGCCTTGAAGGCATTGCAGGAAAAGGAAAAAGAACCGGTTGTACCTGAACCAAAACCAGAGCCAACTACTGAAGTGTTTTTTCTTTGCAGCTATGAAGGATGTGGAAAGACGTTCATTGATGTTGGTGCATTGAGGAAACATTCTCACAGTCATGGAGAGAGACAATTTGTTTGTAACTATGAGGGGTTTGAAAGAGAGGGTGAACCATCTCAGCTTGTTGCTGTGGATTTCTTTGTCAGTACAGTGGATCCATTGAAGGAACATCCGCTTATCACAGTTAACACAGTGCTTTCTATTCTTGTTGTGGACTACCTTGTGGATAAAGTATCATGTTATGTATTTGATGATGGTGCTGCAATGCTTACATTTGAATCCCATGTGGAGACAACTGATTTTGCAAGAAAGTGGGTTCCATTTTGCAAGCAGTACTCGATTTAG 465 0.4108 MLLRWVREDALKALQEKEKEPVVPEPKPEPTTEVFFLCSYEGCGKTFIDVGALRKHSHSHGERQFVCNYEGFEREGEPSQLVAVDFFVSTVDPLKEHPLITVNTVLSILVVDYLVDKVSCYVFDDGAAMLTFESHVETTDFARKWVPFCKQYSI 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02836 154 Gene3D Classic Zinc Finger 36 61 - -
Aip09g02836 154 ProSiteProfiles Zinc finger C2H2 type domain profile. 36 65 IPR013087 -
Aip09g02836 154 PANTHER CELLULOSE SYNTHASE 72 154 - -
Aip09g02836 154 SUPERFAMILY beta-beta-alpha zinc fingers 37 61 IPR036236 -
Aip09g02836 154 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 72 154 - -
Aip09g02836 154 Pfam Cellulose synthase 84 154 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aip09g02836 154 SMART c2h2final6 36 60 IPR013087 -
Aip09g02836 154 ProSitePatterns Zinc finger C2H2 type domain signature. 38 60 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02836 Aip-Chr9 128964417 128966478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02836 72 154 Glycosyltransferase AT4G18780 85.542 4.02e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip09g02836 Cellulose_synt 2.4e-33 CL0110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02836 K10999 - pvy:116111619 145.591