Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02826 ATGATAAAATCCGTTCTGAGCTGCATATTTCTTAGTGAAAAGCAAGCTAAAGAAGAGAGAAATATGTCTATTGCATTAGTAGAAAATCACACCTTTACAAATACAAAAGAAATTGAATACTGTTGTCTGTACTTCACTTATGGATACTGCTTTGGTGTGGAGTTGACTATTGATAACATCATAGCTGAATACTTCTGTGACAGATTCAATCTCAAGCTGCACACTGCTGGGATCATTGCTGCCAGTTTCGGATTGGCGAATCTTTTCTCCAGGCCCGGTGGAGGGTTCATATCTGATGCAGTTTCAAAGAGGTTTGGAATGAGGGATAGTCAGAGTTCAACAGCAACCACCTTAAGATGCTGTTTTGCTCTTCATAGTTTGAAATTGGATTGCAAGACAAAGAGAATGTTTGAGGAAAAGGAGTGTTACAGTAAGTTGACTGAACAAAAATTGACGAGAATGAAGTTTTTCTCATCAAATGCTAGCTCAACAAGAATCCGACAATATCAGAGGGTGAAAACCAACGAGAGTTCTATTTTTCTTGAAGGTGAGGATATAAATATGAGCATTTCACATGCTGCTGATTCTATTGGTTTGAAAGAGATACCAAGATATGAAGTTAAAATTATTGAGGAGGATGACTGGATGAAAGGAGCTCAGTTTGGTGCTGCCTTTGCCATTGGAGTCGATATAGATTCACAAGCAATTGCATCAGCATCTGAAAATGCTACTCTGAATAACATCAGACCAGACAAGCTACAACTGCACTTGATTGCAAGCCAAACTTCTTCATCCTGCAGGGATGACTGGCCATCTAGAGTTGTCGAGGGAGAAAATGCTTTCGAGATAGACAGAGTCACTCACAAGGATAAATATGATGTGGTCATTGCAAACATACTTTTAAATCCTCTGTTAAATCTTGCTGATCAAATTATCTTTTCTGCAAAGCCTGGAGCAATTATTGGTCTCTCTGGAATCTTAAGTAAACAGGTCCAGAACTTATTACAGAAATATTCACTATTCTTAGAAGGCATAGAAGTGTCGAAAATGGATGACTGGGCCTGTACGTCAGCTACCACCACCTACTCGACTCTTATCTGGTCTTTGCTGTCGCCGTTCAGCCCATCCGTCGCCGTCGGTCTCAGTCTATCTTCCGGCGTCGTTCCTATGCTCTCTTTTCCCATCTCCTCTTCTCTCTTCCCTCATCGAGTCGTCGTCAGCGCCGTGGAAGCATCAAATACGTCACCGCGACCATCTTCTTCCCCTCCTTACAATCTCGCACTGTGGGCCTGTGGCTCTCTAGCTTGCCCATGCCTCCCTCATTCCCAGTCGCAAAATCAAAACAGAGCCACTCTAGTGTTAATTCGACTCAGTATGTGTGATCCTATCTTCACCATTGGTCAAGATCGTCAGTGCAATTTATGGCTTAAAGATCCAACTGTTGGCAATATTTTATGCAAGTTGAGAAACATCGAGGTAGCAGAAGCGAGAAAGCAAGCTTCTATCATTGAATCATATCTTGAGCAAAGAGGAGTAGATTTTTCTGAAGGATACATATCTTATAAAGTTGTACTTCCTAATCCTAAATTATGGCCGTAA 1599 0.4134 MIKSVLSCIFLSEKQAKEERNMSIALVENHTFTNTKEIEYCCLYFTYGYCFGVELTIDNIIAEYFCDRFNLKLHTAGIIAASFGLANLFSRPGGGFISDAVSKRFGMRDSQSSTATTLRCCFALHSLKLDCKTKRMFEEKECYSKLTEQKLTRMKFFSSNASSTRIRQYQRVKTNESSIFLEGEDINMSISHAADSIGLKEIPRYEVKIIEEDDWMKGAQFGAAFAIGVDIDSQAIASASENATLNNIRPDKLQLHLIASQTSSSCRDDWPSRVVEGENAFEIDRVTHKDKYDVVIANILLNPLLNLADQIIFSAKPGAIIGLSGILSKQVQNLLQKYSLFLEGIEVSKMDDWACTSATTTYSTLIWSLLSPFSPSVAVGLSLSSGVVPMLSFPISSSLFPHRVVVSAVEASNTSPRPSSSPPYNLALWACGSLACPCLPHSQSQNQNRATLVLIRLSMCDPIFTIGQDRQCNLWLKDPTVGNILCKLRNIEVAEARKQASIIESYLEQRGVDFSEGYISYKVVLPNPKLWP 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02826 532 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 219 367 IPR029063 -
Aip09g02826 532 SUPERFAMILY MFS general substrate transporter 39 108 IPR036259 -
Aip09g02826 532 Pfam Ribosomal protein L11 methyltransferase (PrmA) 219 359 - -
Aip09g02826 532 Gene3D MFS general substrate transporter like domains 30 130 IPR036259 -
Aip09g02826 532 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 154 218 - -
Aip09g02826 532 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 219 359 - -
Aip09g02826 532 Gene3D Vaccinia Virus protein VP39 216 363 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02826 Aip-Chr9 128470955 128483586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02826 47 109 Inorganic Solute Cotransporters AT1G12940 82.540 9.86e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02826 - - ahf:112758361 362.844