Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02807 ATGTGGAACAAAAAATTGGTAGCTAAAGATTCCAGCGAGAACTTTGTTCTCCAAGGCGAAACCTCTCATAATGCCAAAAACAGAACTTCAGCTTCTGATGATACTAGTATTATAGGTGTTAAGGTAGAAAAATCAGCAGAGTTTTCGTATGAGGAACTAGCCAATGCCACAAATAACTTCAGTTTGGCTAAAAAGATTGGTCAAGGTGGTTTTGGTGAAGTCTATTATGGAGAAAATGGCGAGGTTGCGGATTTTGGACTGACCAAGCTGATTGATGTTGGAAGCTCATCAGCTCCAACTGCTAATATGGCTGGCACATTCGGCTACATGCCACCAGAATATGTATATCGAAGTGTTTCTCCCAAAATAGATGTATATGCTTTCGGAGTTGTTCTATATGAGCTTATTTCTGCAAAAGAAGCTTTGATGAGGAGTGGTGGTGCATCTGGTGCTGAATTGAAGGGCCTTGTGGCTTTGGTGATTATTAATGACTTTGCTATGGAGTTGCTTCAGATCGAGAAGCAGCGCAAGGACGAAGCTCACAGAGAAGCCCTTAGAGTTCCCAATGAGGAGCGCAAGAAGCTCAAGGCCGTAGCTGCGCAAATCAGGGCTCAGGAGCACAAGATCGCACAACAAGAAGTCAGAGAAACACTCTTAAAAGAAAGAGCTGAGAAACTTGAAAATTGGAGGATGAAGGTCAAAAAGCATGGTGAGAAGATGGCAGAAAAGAAAGAGTTATTGCGTCGACAAAGCTCAATGTGGATCGATGAAGCTAATCTTGAGGCACAAATGATGAAGCTAATCTTGAGGCACAAATATTGGAATCCATCGTTTCCTTTTGCTGAGTCCCTTATATTTCCACATTTGTTATGGTTGGGATCAGTGTTGTGTTATCTGTTACATAGAAGTTATATTTTTGTCCTATGTTCAATCAAGGTTGCATCATCATGCAAATAA 957 0.4127 MWNKKLVAKDSSENFVLQGETSHNAKNRTSASDDTSIIGVKVEKSAEFSYEELANATNNFSLAKKIGQGGFGEVYYGENGEVADFGLTKLIDVGSSSAPTANMAGTFGYMPPEYVYRSVSPKIDVYAFGVVLYELISAKEALMRSGGASGAELKGLVALVIINDFAMELLQIEKQRKDEAHREALRVPNEERKKLKAVAAQIRAQEHKIAQQEVRETLLKERAEKLENWRMKVKKHGEKMAEKKELLRRQSSMWIDEANLEAQMMKLILRHKYWNPSFPFAESLIFPHLLWLGSVLCYLLHRSYIFVLCSIKVASSCK 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02807 318 Pfam Protein kinase domain 82 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02807 318 ProSiteProfiles Protein kinase domain profile. 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02807 318 SUPERFAMILY Protein kinase-like (PK-like) 54 139 IPR011009 -
Aip09g02807 318 Coils Coil 195 215 - -
Aip09g02807 318 Gene3D Transferase(Phosphotransferase) domain 1 79 244 - -
Aip09g02807 318 PANTHER LYSM RECEPTOR KINASE 1B 2 78 - -
Aip09g02807 318 PANTHER LYSM RECEPTOR KINASE 1B 81 159 - -
Aip09g02807 318 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 2 78 IPR044812 GO:0019199|GO:0045087
Aip09g02807 318 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 81 159 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02807 Aip-Chr9 128051137 128054066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02807 21 78 Receptor kinase-like Gene Family AT3G21630 53.448 8.19e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip09g02807 Pkinase 5.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02807 - - ahf:112778870 472.626