LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip09g02801	ATGTCCTGGTTCATTTCAGGGTTACAAAAGCTTTCCTTACTAAACTTGGAAGGGTGCCTTGTAACAGCTGCATGCTTGGATTCTCTTGCAGTCATGGAGAATGATGGCAAAGAGTCATATAAGGATGGTGATCAATCTGAGGATTTAAGTGTTGAGTATAAGTGCAGTTCTGATGAAAGTGATAATATGGTGGATGTAACTGTAGATGAAGCAGAGGCATATATAATTAATGCTGATGGTTTTGAAAAGTTGATAACTGATTTGACCATCGAAGACATATGGGGACTGGTGTTTGATACAGAATCTCAAGTTTGTGAATTTTACGCCAAATATGCCAAGTGCTATGGATTTGTGTCCCGAAAAGACTTGAAGACGGTGGATGCTAATGGCAACATTAATACAAGACAGTTGGTTTGTAATAAAGCAGGAGAAAGACATTGGAAGCACCTTAAAAGGGACAATCGGCAAAGGGAGCATAAGAAAATTACTCGTGTCAACTGCAGGGCAAGGATTCGGTTCATTCATCACTATAGAACGGGTAAGTGGAAAGTTAGTGTCTTTGAGAGTGAACACAATCATCCACTGTGTCCACCTAAGTACAGACATCTTATTGCTGCGATTCGTGGGCTTGATGAGGCCGATAAAACACAAGCAGACAGCTTGCGAGCATGTGGTGTTAAAACTTGCCACATAATGGGTTACATGGTTTCCCAAAAAGGTGGATACGCTAAAGTGGGTTTTACCAGCAAAGACTTACATAACCACATTAGTAAGACTAGGCATGGCAAAGTGAAAGACGGTGATGCATTTGCTGCGTTGGCCTCTCTGTTGTTCAAGGCAGACAGTGACCCGTTATTTCTATGA	864	0.4144	MSWFISGLQKLSLLNLEGCLVTAACLDSLAVMENDGKESYKDGDQSEDLSVEYKCSSDESDNMVDVTVDEAEAYIINADGFEKLITDLTIEDIWGLVFDTESQVCEFYAKYAKCYGFVSRKDLKTVDANGNINTRQLVCNKAGERHWKHLKRDNRQREHKKITRVNCRARIRFIHHYRTGKWKVSVFESEHNHPLCPPKYRHLIAAIRGLDEADKTQADSLRACGVKTCHIMGYMVSQKGGYAKVGFTSKDLHNHISKTRHGKVKDGDAFAALASLLFKADSDPLFL	287

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip09g02801	287	Pfam	FAR1 DNA-binding domain	106	196	IPR004330	-
	Aip09g02801	287	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	38	202	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip09g02801	Aip-Chr9	127870125	127883099	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Aip09g02801		FAR1	1.2e-18	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip09g02801	-		-	aip:110269479	469.159