Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip09g02799 | ATGCTCAAGTATGACTCGTTCTATAAATACAACACTCTGTTCAGGCCAAGGATACTTGATTTTGCATTTGTGGATATGCTAGAAACAGGAGAACAAGCTCTTGGCTCTAATGATTGTGGGGGTATGGGTGGCAACCTGGATGACAAACTACAGGAAGACGGTTCTGAGAATGGTGACACTGTTAACTATGCAACTGTGGTCAGGGAAGTGAAAGCATATTTGAAGAAAGGTGTTGCAGCGAAGGAATTGCAGTCACATATTGTTGCATTTCCTGTATCTGCTCAGGAGAAGATGAATGCACTTGTTGAAGGATTATTTGATGGCGTCCAAAAAGCGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGGTGCAGTAGCTGGAGATGACGAGGGATCACAGCTGTTATTGCTCAATGCTGCTGAGGAGTTCTGTTACAAGAAAGGTAGCAATGAGTTGAATGAGGTTGCACTTATTCTGAAAGCCCTCTATGATGTTGATTTGGTGGAGGAAGAGCATGTCGTGCATTGGTATTCAAAGGGACTGAAGGGTGATAAGAAGGACTCTCAGATATGGAAGAATGCTCAACCATTCATTGATTGGATTCGGAATGCTGAATCAGAATTGGAGGAAGAATGA | 645 | 0.4295 | MLKYDSFYKYNTLFRPRILDFAFVDMLETGEQALGSNDCGGMGGNLDDKLQEDGSENGDTVNYATVVREVKAYLKKGVAAKELQSHIVAFPVSAQEKMNALVEGLFDGVQKAFGKEATKRKNHLAGAVAGDDEGSQLLLLNAAEEFCYKKGSNELNEVALILKALYDVDLVEEEHVVHWYSKGLKGDKKDSQIWKNAQPFIDWIRNAESELEEE | 214 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip09g02799 | 214 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE | 54 | 214 | - | - | |
| Aip09g02799 | 214 | CDD | W2_eIF5 | 66 | 210 | - | - | |
| Aip09g02799 | 214 | Pfam | eIF4-gamma/eIF5/eIF2-epsilon | 136 | 214 | IPR003307 | GO:0005515 | |
| Aip09g02799 | 214 | SUPERFAMILY | ARM repeat | 62 | 208 | IPR016024 | - | |
| Aip09g02799 | 214 | ProSiteProfiles | W2 domain profile. | 53 | 214 | IPR003307 | GO:0005515 | |
| Aip09g02799 | 214 | Gene3D | - | 51 | 205 | - | - | |
| Aip09g02799 | 214 | SMART | 542_3 | 122 | 210 | IPR003307 | GO:0005515 | |
| Aip09g02799 | 214 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 54 | 214 | IPR045196 | GO:0003743|GO:0006413 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip09g02799 | Aip-Chr9 | 127862764 | 127864973 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip09g02799 | 66 | 207 | Eukaryotic Initiation Factors Gene Family | AT1G77840 | 50.350 | 4.47e-42 | 145 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip09g02799 | K03262 | - | aip:107619007 | 313.153 |