Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02778 ATGGACAAATTGGTCCTTGCGGCCATCATACGCTCTCTCTCTCTCTCTCTCTCGTCGCAACTCACCTTGGTCCGACTCCGTCACCGCTCTCATCAACTCTGCCACCGGCCACCATCTCTCCTACGCCGATTTCATCTGCCGTTCAGAAACCCTAGCTGCCAACTGTACATCCCTCTTCACACTCTCCAAAAACGAGACCGCTTTGGTCCTCTCTCCAAACCACTCTCCACGTTCCTACCCTCCACTTCGCACTCCTCTCTCTCGGCGTCGTTATTTCGCTGGCAAATCCACTTGCTACGCTCTCCGATCTCACGCGCATCATCCGCCTTAGCAAACCTACCATTGCATTTGCCACGTCATCAGCGGCTAACAACCTTCCTGATGAGTTCCGTCACGGCCGTCCTCATCGACTCGCCCGAGTTCAAATCGCCCATGACAGCGAGTCGACCCGGCGCCAAACTCGAACAAGTGGAGGTGAGTCAGTCTGATGTGGTAGCTATTCTTTACTCTTCAGGAACCACAGGGAAAGTGAAGGGAGTGATGCTGACTCACAGGAATCTGATTGCAGAGACCTGGTTTGTGAAGATGGGTAACCAAGTCAGTTCTAATCTCAAGCATGCCCTTCTTCTAGAAACTTCTTCGGGAAAGAGGAAGCAGCAGCAACATAGCATCAAGAACAACGATAAGCTCCTCGACCTTGCTCTCGCCGAGAAGCTCGACGAGTTGAACCACGTCGCCGACGTCATTTTCAGGTTAGGGAAGAAGTGTTCTATTCCTGCATTGCAGGGATTTGAGCATGTGTATAGTGACATTGTGAGTGGGGTCATAGATGTCAATGAATTAGGGTTCTTGGTTAAGCATATGGAAGGTATGGTGAGGAAGATGGATACGTATGTTAGTAACACTAAGAATTTGTATAGTGAAATGGAGGTTTTGAATCAATTGGAGCAAGCTATGAACAAGTTTCAGAATAATCAGAATGAGGAGATTAGGAGGGTCTTTGAGTAG 1008 0.4921 MDKLVLAAIIRSLSLSLSSQLTLVRLRHRSHQLCHRPPSLLRRFHLPFRNPSCQLYIPLHTLQKRDRFGPLSKPLSTFLPSTSHSSLSASLFRWQIHLLRSPISRASSALANLPLHLPRHQRLTTFLMSSVTAVLIDSPEFKSPMTASRPGAKLEQVEVSQSDVVAILYSSGTTGKVKGVMLTHRNLIAETWFVKMGNQVSSNLKHALLLETSSGKRKQQQHSIKNNDKLLDLALAEKLDELNHVADVIFRLGKKCSIPALQGFEHVYSDIVSGVIDVNELGFLVKHMEGMVRKMDTYVSNTKNLYSEMEVLNQLEQAMNKFQNNQNEEIRRVFE 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02778 335 PANTHER DUF3475 DOMAIN PROTEIN 228 335 - -
Aip09g02778 335 SUPERFAMILY Acetyl-CoA synthetase-like 142 199 - -
Aip09g02778 335 ProSitePatterns Putative AMP-binding domain signature. 167 178 IPR020845 -
Aip09g02778 335 Gene3D - 129 183 - -
Aip09g02778 335 PANTHER BNAC09G50660D PROTEIN 228 335 - -
Aip09g02778 335 Coils Coil 312 332 - -
Aip09g02778 335 Pfam AMP-binding enzyme 134 197 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02778 Aip-Chr9 127402698 127403861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02778 134 191 Monolignol Biosynthesis Gene Families AT5G63380 61.017 2.14e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02778 - - gmx:100805617 186.808