Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02764 ATGTCAGGAATGGAAATTTGGCCAGCCGAAGACGAGTCTAGTGAGTCTCTACCACCATTCAATAACAGGAGTGGCTACGATTCGAGAACTGGCATCTACCACTCTCTTGTTAGACTTGGCACCAAGCATGAGATCCCAACAAAGCCTGATCTCAATGTTGCCCATCTCGTGCTATCGCAGTTCCCACAAGGAGACCTTGCAGAGGCAAGAATAGCATTCGTTGATGCAGCAACTGATAAGAGTTTGAGTTATGGCGAGCTACGCAGATCAGTATACTCCCTTGCATCAGCCTTGTTCCATGGACTTGGGGTTAGGAAAGGGGATGTGCTGTTTCTCCTATCCCCTAACTCAATCCTGTTCCCAACCATATGTCTAGCCGTGTTATCAATTGGTGCAGTTCTTACCACTGCCAACCCTCTTAATACCGAGTCAGAAATTGCCAAGCAGGTACGCGACTCAGGTTCTAAACTAGCCATCTCAGCACCGGAGGAGCTACACAAATTGGTCTCAACTGGGGTGCCTACAATGCTCACATATTGTCCATCTAACAGCGGAATGCTATCAGTTGAAGAGTTGATAGAAGGCTGCTCTTGTTCTCTGGAGTTGCCGCAGGTTACTGTGGTTCAATCAGACCCTGCTGCTATACTTTACTCCTCAGGGACTACTGGGGTAAGTAAAGGTGTAGTTTTGACACACCAGAATCTCATTTCCACACTGAAACTTCTCTTCTGGTCTGTTGATGTAAGTGCATCTTCAGATGATGTCTTCTTGGCCTTCATTCCGATGTTTCATGTATACGGCCTGGTTTTCTTTGGATTAGGAATGCTGTGTGTTGGTGTTAAAATAATTGTGATGCAGAAATTTGACTTCCAAGCTATGCTTCTTGCTATTCAGAAGCACAAAGTTAATAACTTACCGGCAGTGCCGCCAGTGATCCTTGCTCTAGTGAAATATGCAAGCAAAGCTGGTTGTGACTTGTCCAGCCTCCGAAGGACGGGTACAGGTGCTGCGCCTTTGAGTAAGGAAGTGTCACGGGAGTTCAGAAAAATGTTTCCATGGGTTGAACTAAGGCAAGGTTATGGCCTAACAGAAAGCTCAGCTGCAGCTACCTTTCTTGTGTCAGACAGGGATGCTAAAGCTCGGCCAGACTCATGCGGCCAGTTGCTTCCAACCTTTTGTGCAAAGGTCGTAGACATTGATACCGGAAAGCCTTTGCCTCCTCAAAAGAAAGGAGAGCTGTGGCTGAAAAGTACTACTATTATGAAAGAGTATCTGGGAAATTCGGAGGCAACAACCCTAACAGTTGATTCAGATGGCTGGCTGAAGACAGGTGATCTCAGTTACATTGATGAAAGTGGATTTGTTTATATAGTTGAACGGATAAAGGAGCTGATCAAGCACAATGGATATCAGGTGGCTCCTGCAGAACTGGAGTCTTTATTGCTAAGCCATCCCCTTATTGTTGATGCAGCTGTTATACCGTTTGAAGATGAAGCAACTGGACAGATACCAATGGCCTATGTTGTGAGAGCAGCTGGTTCTGAACTCTCAGAAGACCAAGTCATTCAATATGTTGCAGGCCAGGTGGCTCCATATAAGAAAGTGAGAAGGGTGAGTTTCATTGAAACTATTCCAAGGTCAGCAGCTGGCAAGATATTGCGCAAGGACCTCGTTTCTCTAAGCAGACAACAACTTGTCTCCAAGTTATGA 1710 0.4579 MSGMEIWPAEDESSESLPPFNNRSGYDSRTGIYHSLVRLGTKHEIPTKPDLNVAHLVLSQFPQGDLAEARIAFVDAATDKSLSYGELRRSVYSLASALFHGLGVRKGDVLFLLSPNSILFPTICLAVLSIGAVLTTANPLNTESEIAKQVRDSGSKLAISAPEELHKLVSTGVPTMLTYCPSNSGMLSVEELIEGCSCSLELPQVTVVQSDPAAILYSSGTTGVSKGVVLTHQNLISTLKLLFWSVDVSASSDDVFLAFIPMFHVYGLVFFGLGMLCVGVKIIVMQKFDFQAMLLAIQKHKVNNLPAVPPVILALVKYASKAGCDLSSLRRTGTGAAPLSKEVSREFRKMFPWVELRQGYGLTESSAAATFLVSDRDAKARPDSCGQLLPTFCAKVVDIDTGKPLPPQKKGELWLKSTTIMKEYLGNSEATTLTVDSDGWLKTGDLSYIDESGFVYIVERIKELIKHNGYQVAPAELESLLLSHPLIVDAAVIPFEDEATGQIPMAYVVRAAGSELSEDQVIQYVAGQVAPYKKVRRVSFIETIPRSAAGKILRKDLVSLSRQQLVSKL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02764 569 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 18 568 - -
Aip09g02764 569 SUPERFAMILY Acetyl-CoA synthetase-like 69 561 - -
Aip09g02764 569 Gene3D - 463 566 IPR045851 -
Aip09g02764 569 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 568 - -
Aip09g02764 569 Pfam AMP-binding enzyme 69 466 IPR000873 -
Aip09g02764 569 Gene3D - 41 462 IPR042099 -
Aip09g02764 569 CDD 4CL 45 557 - -
Aip09g02764 569 MobiDBLite consensus disorder prediction 1 23 - -
Aip09g02764 569 Pfam AMP-binding enzyme C-terminal domain 476 551 IPR025110 -
Aip09g02764 569 ProSitePatterns Putative AMP-binding domain signature. 215 226 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02764 Aip-Chr9 127008828 127011174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02764 27 565 Monolignol Biosynthesis Gene Families AT1G20500 43.659 7.97e-152 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02764 K10526 - gmx:100796728 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g02764 09 127008828 127011174 Aip09g02764 09 127008828 127011174 ECH