Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02763 ATGGAATCAGAAATTGGTGATGATGTTCCCATTGTTGGCATGGAATTTGAGTCTATGGATGTAGTAATCCAATTTTACAACACCTATGGAAGAAGAGTTGCCTTTGACTGGAGGAATAGGAGTTTGAAAAAGAATGCCGATGGGGTTGTATACTATGTTATGCTTATCTGCAATTGGAAGGGCAGAGCCGAATCAAAGGTTGATGAAACGAAGAGGACCTATCCAAAAGGACCTACAGGGTGTAAAGTCAGAATGATTGCCTCTTCTGATGTCGACGGTAGTTGGATTGTTAGGGTAGTTGAACTCGAACACTGTCACGATCTGAACTGCACTAATTTAAGATGGCCGCCAGTAGCTATTGTAACTGACCAATGTCCCTTTATGAGAGCTGCTATTACGAAGGTTCTGCCACATACTAGGCGTAGGTGGTGCTTGTGGCATATAATAAAGAAGGTTCATGAGAAGTTGAAAGGATATGGTTGCTACGAAGATATTCAGGTTACATTGAGTGAAGTAGTCCACCAAAGTTTGACTATAGAGGAGTTTGAAGACAATTGGACTGATTTTGTGAATGCCTACTGTCTCAAGGATAACAAATGGTTGCAAAGGCTGTTGAATGATGGcatatgttag 633 0.4076 MESEIGDDVPIVGMEFESMDVVIQFYNTYGRRVAFDWRNRSLKKNADGVVYYVMLICNWKGRAESKVDETKRTYPKGPTGCKVRMIASSDVDGSWIVRVVELEHCHDLNCTNLRWPPVAIVTDQCPFMRAAITKVLPHTRRRWCLWHIIKKVHEKLKGYGCYEDIQVTLSEVVHQSLTIEEFEDNWTDFVNAYCLKDNKWLQRLLNDGIC 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02763 210 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 109 IPR031052 GO:0006355
Aip09g02763 210 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 110 206 IPR031052 GO:0006355
Aip09g02763 210 Pfam MULE transposase domain 111 151 IPR018289 -
Aip09g02763 210 Pfam FAR1 DNA-binding domain 24 109 IPR004330 -
Aip09g02763 210 PANTHER OS03G0843700 PROTEIN 6 109 - -
Aip09g02763 210 PANTHER OS03G0843700 PROTEIN 110 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02763 Aip-Chr9 126990991 126992141 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g02763 FAR1 2.8e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02763 - - aip:107640510 193.741