Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02760 ATGGGTCGTGAAACCCTTCTTCATCCACCACCACCATCCACCACCACCGCAACAGCCACACACACCCCACCACCGCCGCCGCCACTGCCGTCTCTACCTTCATTGACCCAAGCAGGACCATCAGGAGGAGTATCAGCATCTGCACCTTCACCATCTGCTTCACCTTCTTCTCCTGCTATTGTTGCTACTACTGCTGTGGCTACTGCAGTTGCTGCTCCTCCTACCTCTCTTGCTCCTGGTTTCAGGTTCCATCCTACGGATGAGGAGCTTGTTATCTATTACCTCAAGCGCAAGGTTTGTGGCAAAAGCTTCCGATTTGATGCAATTTCTGAGGTTGACATCTACAGGAGCGAACCCTGGGACCTTGCAGATAAGTCGAGGTTGAAGACTAGGGACCAAGAATGGTACTTCTTTAGTGCACTGGACAAGAAGTATGGCAATGGTGGGAGGATGAACAGGGCCACAAGCAAAGGATACTGGAAGGCTACAGGGAACGATCGTCCGGTTAAGCATGAACAAAGGACCGTGGGGTTGAAGAAAACTCTGGTGTTCCATAGTGGAAGAGCCCCAGATGGTAAGAGGACCAATTGGGTCATGCATGAGTACCGACTCGTCGACGAAGAGCTGGAGAGGGCTAGGTCTGGATCCTCTCAGCCTCAGGATACTCAATCTAACAACAAAGTTCCATTTGATGTGAACAAGCTTCCCATTGAGACTCAAAGTCTGCTAGCTGTCTGCAAAAGGGAGAGTATGGCCGAGTTTCCATCACCTGAAAAGGAGGATAACTCGAAGCGTCAGATTGATGAGTATCCTTTGCCACAAACAGAAAACACCAAGCCTATCTCCCAAATATACAAAAGGAGGAGGCATTATTTGAATGTCAACCATTCAAATGTCAACGGAGATTCAGTCCGAACCATCCAAGAACCGCCATGTTCATCAACAATAACCACCGCCGCAACGACGCTCCCGACGGCCACCACCACAGCCTCCACTGCGATAACCAACGTTGCACCCAAAAAACATTTCTTGTCTGCACTGGTGGAGTTTTCCTTGATGGAATCCCTCGAATCGAAGGGAAATCCATCCGTTCAACCACCAGAGTTTGATGATGCTTCCTTAGAGGCATCCGTGCCGCCAAATTGTGTTAAGCTCATCAAACGCATGCAGGGCGAGATTTACAAACTTTCCGAGGAAAGGGAGACTATGAGGTTTGAGATGATGAGCGCACAAGCAATGATTAACATGCTCGAGTCGCGCATTGAAATTTTGAGCAAAGAAAATGAGGAACTGAAGAGCATGATTAACAACAATCCTTAG 1320 0.4879 MGRETLLHPPPPSTTTATATHTPPPPPPLPSLPSLTQAGPSGGVSASAPSPSASPSSPAIVATTAVATAVAAPPTSLAPGFRFHPTDEELVIYYLKRKVCGKSFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATSKGYWKATGNDRPVKHEQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVDEELERARSGSSQPQDTQSNNKVPFDVNKLPIETQSLLAVCKRESMAEFPSPEKEDNSKRQIDEYPLPQTENTKPISQIYKRRRHYLNVNHSNVNGDSVRTIQEPPCSSTITTAATTLPTATTTASTAITNVAPKKHFLSALVEFSLMESLESKGNPSVQPPEFDDASLEASVPPNCVKLIKRMQGEIYKLSEERETMRFEMMSAQAMINMLESRIEILSKENEELKSMINNNP 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02760 439 MobiDBLite consensus disorder prediction 215 230 - -
Aip09g02760 439 MobiDBLite consensus disorder prediction 35 58 - -
Aip09g02760 439 Gene3D NAC domain 86 247 IPR036093 GO:0003677|GO:0006355
Aip09g02760 439 MobiDBLite consensus disorder prediction 209 232 - -
Aip09g02760 439 PANTHER NAC DOMAIN-CONTAINING PROTEIN-RELATED 66 433 - -
Aip09g02760 439 ProSiteProfiles NAC domain profile. 77 231 IPR003441 GO:0003677|GO:0006355
Aip09g02760 439 MobiDBLite consensus disorder prediction 252 267 - -
Aip09g02760 439 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 66 433 - -
Aip09g02760 439 Pfam No apical meristem (NAM) protein 79 204 IPR003441 GO:0003677|GO:0006355
Aip09g02760 439 MobiDBLite consensus disorder prediction 1 58 - -
Aip09g02760 439 MobiDBLite consensus disorder prediction 16 34 - -
Aip09g02760 439 Coils Coil 407 434 - -
Aip09g02760 439 MobiDBLite consensus disorder prediction 251 281 - -
Aip09g02760 439 SUPERFAMILY NAC domain 67 209 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02760 Aip-Chr9 126935207 126941266 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02760 347 432 NAC Transcription Factor Family AT3G10480 41.111 1.60e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip09g02760 NAM 3.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02760 - - ccaj:109805026 453.366