Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02712 ATGGTGAACAATTCATCAAACCATTCTCACCTTATTAGGCTGCTGACCGTCGGCAACAAAATGTTCGGGAGCTTCTTCCAGTGGTTTCAATGGAACCATTCTCACCTTATGATGCGGTGTCGCTGGAAGGAGCCACACGCTGGGAGAAGGGCGTTCACCAATGAGGACCTCAACGTCTCCGGGAGCGACTTCCGGATGGAATGTATGATATGGGAGTTGAGGCAGATGAAGCTCTTGATCCCAGACCAGTTGATAAATCTGGAAGGTGTTACTGTAGATGATGTTCTTCAAATGGAATTTAGCACTCCCGAAGAAGCAAGTGGTTTCTACAACAACTATAGTCGACTGAAAGGTTTTGCATCAAGGCAAGGGAAGAAAATAAGAAATAGCATAGGGCAGATTGTTAGATATACATTTGTATGTAACAGGCAGGGTTTTCGAGAGAAGAAATGGTTGGAAAAAATGGATAGGAAAATGGAGCATAAGGTAGTCACTCGTTGTGGGTGTCTCGCTGAGATGAGGATTAAGAAAAAAGATGGAACCGGGAATTGGTACGTGTCGCGGTTCATTGATGAACATAACCACGAGATGGTATCTGGAAAGTTTGTAAATTATCTAAGATCACATAGGAAGATATCGGAGGTTGAGATTGCTCAGCTGACTAGTATGAGGGAATTGGGATTAGTATTCCAAAGATATATGAATCCTTTGCAGCACAGCTTGGAGGTTTTAATAAGGTTCCTTTCACGAAACAAGATATGTATAACGAGGTTAGGAGGCAAAGAGAATTGCAAGGTGGAGATGTGA 807 0.43 MVNNSSNHSHLIRLLTVGNKMFGSFFQWFQWNHSHLMMRCRWKEPHAGRRAFTNEDLNVSGSDFRMECMIWELRQMKLLIPDQLINLEGVTVDDVLQMEFSTPEEASGFYNNYSRLKGFASRQGKKIRNSIGQIVRYTFVCNRQGFREKKWLEKMDRKMEHKVVTRCGCLAEMRIKKKDGTGNWYVSRFIDEHNHEMVSGKFVNYLRSHRKISEVEIAQLTSMRELGLVFQRYMNPLQHSLEVLIRFLSRNKICITRLGGKENCKVEM 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02712 268 Pfam FAR1 DNA-binding domain 109 198 IPR004330 -
Aip09g02712 268 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 91 235 - -
Aip09g02712 268 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 91 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02712 Aip-Chr9 125298982 125308146 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g02712 FAR1 6.1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02712 - - aip:107620408 251.906