Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02706 ATGTTTGCTCTCTTGTCCTGTTTGAAGCGTCCCCGGCGTGTTCAGTCTCACTGCATCCCGCGAGTGCTGGAGGGCCGCCACGTGCTCGGCATCAATGAAACTGGCAGCGACAAGACCACCGCTTTCGCCCTCCCGATCGTCCACCGCCTGTCGGAGCACCCGTTCAGTGTGTTCGCGTTGGTGGTGATGTCCACTAGGGAACTGGCATTCCAGCTACCAGAGCAGTTCCGCGCCCTCGATTCCTGCCTCCACCTCCGCATTGCAGTGGTTGTCAGCGGCATGGATATGCTTCGGCAAACCAAGGAGCTTGCTGCTAGGCCCCACGTCATTATTGCCATGCCGGGGAGGATCAAGGCCTTGCTCGAGAATCCTGATATTCCTCTAGTTTTTGCTAGAACTAAGATCGAGTTCTTGATGTCAGTTTTCAGGAGGAATTGA 438 0.5594 MFALLSCLKRPRRVQSHCIPRVLEGRHVLGINETGSDKTTAFALPIVHRLSEHPFSVFALVVMSTRELAFQLPEQFRALDSCLHLRIAVVVSGMDMLRQTKELAARPHVIIAMPGRIKALLENPDIPLVFARTKIEFLMSVFRRN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02706 145 Pfam DEAD/DEAH box helicase 13 125 IPR011545 GO:0003676|GO:0005524
Aip09g02706 145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 127 IPR027417 -
Aip09g02706 145 Gene3D - 3 139 IPR027417 -
Aip09g02706 145 PANTHER RNA HELICASE 8 135 - -
Aip09g02706 145 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 19 145 IPR014001 -
Aip09g02706 145 PANTHER ATP-DEPENDENT RNA HELICASE DDX49-RELATED 8 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02706 Aip-Chr9 125201448 125202382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02706 6 132 Eukaryotic Initiation Factors Gene Family AT5G11200 31.538 1.15e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02706 K14778 - gmx:100798597 197.593