Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02705 ATGGCAATTGCTGTAGAATCTCAACCTCATGAGATAGGATTATTGGATGAGAATAATAACAACAATAACGATAACAATAGTGGTACGTCATGGTACAACAGGTATCCTAGTATTCAATACTCTAATAAGAGCAAAGTGATTATTGGTGGAGCTACTACTTGCAGCATAGGTAGCTCAAGTTCTTGCGCCATATGCTTGGCTGATTATAATGAATCTGATTGGATAAGAGTGTTGCCTGCATGCGATCACTTTTTTCATCTCAAccaccgccatcgtccttatcgcgggctacTACTGCTGCGCGTGACCGCCGCTGCCTCTGGGTCCATCACCGTCGAGCAGAGTCGCCGCCTCTGGGTCCGTCACCGCCGCTGTTTTCTCCGCCATCGCCGTCCGTGGAGCTCGCCGCCGCCGGAGTTACGAGCTGAGGTGGGGGAGGAGGCCATCTTCCCTGTGTTGTTGCAGTCACCGTGCTGCTACTGGATTAAGCCGCTGCAGCTGTGGGCTGTGATGGTTGATACTCTTTAA 528 0.4697 MAIAVESQPHEIGLLDENNNNNNDNNSGTSWYNRYPSIQYSNKSKVIIGGATTCSIGSSSSCAICLADYNESDWIRVLPACDHFFHLNHRHRPYRGLLLLRVTAAASGSITVEQSRRLWVRHRRCFLRHRRPWSSPPPELRAEVGEEAIFPVLLQSPCCYWIKPLQLWAVMVDTL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02705 175 Pfam RING-like zinc finger 62 87 IPR001841 -
Aip09g02705 175 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 24 87 - -
Aip09g02705 175 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 24 87 IPR045899 -
Aip09g02705 175 SUPERFAMILY RING/U-box 61 87 - -
Aip09g02705 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 92 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02705 Aip-Chr9 125180098 125186264 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02705 58 88 C3H Transcription Factor Family AT5G06490 61.290 1.09e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02705 - - aip:110265236 96.2857