Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02662 ATGAAGGTGGCAATTTCATTTGCCAAGATACTTTTACAAGTGACAAGGCCAAGAACTGCAGTTCTTGGTAAGCTTCCGGGGACTACTGTTTATAGGAACATCCAGCAATACCCCAAAGCAGCACAGATTGCTGGCATGCTCATTATCAGGATTGACTCTGCTATCTACTTCTCAAATTCCAACTATATCAAGGAGAGAATATTGAGATGGTTGATTGAAGAAGAATCTCAGGGTGTGTGTGGTTGGGGGAATTATGCAACATTTCCAGGAATTTTAAGATGGGAATATGAAATTTTTGCTGTTACTGATATTGACACAAGTGGCATCCATGCCTTTGAAGAATTATACAAGACCCTTCAGAAAAGAGAAGTTCAGCTTATATTGGCGAATCCGGGGCCAGTTGTAATAGAGAAGCTCCATGCATCCAAGCTTACCGATCTAATTGGAGAAGATAAAATATTTCTCACAGTGGCTGATGCTGTTGCAACTTTTGGTCCAAAGGAGCCGTCGCCTCTGGATCCGTCACCGCCACTGTTCTCTCCGCCATTGCCGAGTCTGACCCTGCGCCTTGCCGTCGTCGTGTTGCTATTAAGGGAGAAGGGAGCGCGAACGACAGCCATGGACAGAGAAGAGAGCTCGCATGCAGAGGAGGTGAAGTCGTCGCTATCACCATCGCGTGTGGAGTCACCGCCGTGCCCAACCGTCGTCGCCGCCGTTCCTCCACCGTCGCCGAAGTGCTGCTACCCCCTCACACACCTTCACCTCAGCTCCACACATACTCAGCCTCACTACCCTCTCATTGATACAACACACACGCACAGCTCCGCACTCACCGACGGAAGAGAAGGAAGGGAGCGCCAGGGGAGGAGAAGCTCGCCGCCGTCAACCCCGCCGTCGCCGTTCGCGAAGTCCGCGCTAGTGCCGTCGCGGAGGAACGTCCCTGTCGTCGCAAACTATCGCCATCGCCGAACAGGATCCATCGTCCTCGCTGGGAAGCATGTCGCCACTGCTGCTGTCCATCTAGCCCGAGCCGTCGCCGTCGCTGTCGGAAACGCGTATAGGAAAGAGAGCAGGGGGCTTCGTGGCAGCTCCATCGCACCGCTCCTGCCAAGCCACCGCCAAGTCCTGCCGCCGATCGGAACACTAGCCACCACCATCGAAGACGCCACCACCGCCACTGCTGTCAATTGGGATCAAAATTGTTGCTGTGTTCCCAGAGCTGTCATGGAAGTGGTTGATTCGGTCCCAATTCCTCCATTGTTGAGACTGGCTGTGTTCACTTTCGATACCTATTTAATTTGGATTCTCTATTCTGCTGTAACTACCATTACCGTCGTGGATTTATTGTCGCTGCAGCCATGA 1362 0.5228 MKVAISFAKILLQVTRPRTAVLGKLPGTTVYRNIQQYPKAAQIAGMLIIRIDSAIYFSNSNYIKERILRWLIEEESQGVCGWGNYATFPGILRWEYEIFAVTDIDTSGIHAFEELYKTLQKREVQLILANPGPVVIEKLHASKLTDLIGEDKIFLTVADAVATFGPKEPSPLDPSPPLFSPPLPSLTLRLAVVVLLLREKGARTTAMDREESSHAEEVKSSLSPSRVESPPCPTVVAAVPPPSPKCCYPLTHLHLSSTHTQPHYPLIDTTHTHSSALTDGREGRERQGRRSSPPSTPPSPFAKSALVPSRRNVPVVANYRHRRTGSIVLAGKHVATAAVHLARAVAVAVGNAYRKESRGLRGSSIAPLLPSHRQVLPPIGTLATTIEDATTATAVNWDQNCCCVPRAVMEVVDSVPIPPLLRLAVFTFDTYLIWILYSAVTTITVVDLLSLQP 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02662 453 Pfam STAS domain 37 160 IPR002645 -
Aip09g02662 453 ProSiteProfiles STAS domain profile. 36 164 IPR002645 -
Aip09g02662 453 PANTHER SULFATE TRANSPORTER 2 167 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip09g02662 453 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 2 167 - -
Aip09g02662 453 Gene3D STAS domain 16 166 IPR036513 -
Aip09g02662 453 SUPERFAMILY SpoIIaa-like 39 165 IPR036513 -
Aip09g02662 453 MobiDBLite consensus disorder prediction 275 289 - -
Aip09g02662 453 MobiDBLite consensus disorder prediction 203 232 - -
Aip09g02662 453 MobiDBLite consensus disorder prediction 203 217 - -
Aip09g02662 453 MobiDBLite consensus disorder prediction 261 307 - -
Aip09g02662 453 CDD STAS_SulP_like_sulfate_transporter 37 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02662 Aip-Chr9 124353662 124369895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02662 1 167 Inorganic Solute Cotransporters AT1G22150 65.269 1.18e-63 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02662 K17470 - gmx:100806204 248.825