Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02646 ATGGAAGATTTGAAGTTACATGGATTTTGGTATAGTCCCTTTACAATGAGGGTGGTATGGACCCTGAAGTTGAAGGGTCTATTATATGAAAACATTGAAGAAGATCGCTACAATAAGAGTCCTCAACTTCTAGAATACAACCCTGTGCATAAGAAGATTCCAGTGCTTGTTCATGGCGGAAAACCCATTTGTGAGTCCATGATCATTGTTCAATACATTGATGAGTTATGGCCACAGAATCCATTGGTCCCTCATGATCCCTTTGAGAGAGCTCAATCAAGGTTTTGGGTTGCATATTCTGAACAATTGTTTCCTGCAGTTGTGCCACTAATTTACGTCGACATTGCTGGTGATGAAGAGAAGGAGAAGGCCATAGAGAATGTCCAAAAACTTCTAAGAGATGTTGAAGATCAATGCGTGTTATTGGTTGATGAAAAAAAATTCTTTGGTGGTGACAATATCAATATGGTGGACATAGCTTTTGGGTCAATGATCAAATTTCTTGTAACTATGGAAGATCTGAATGAATTGAAGGTGCTAGAAGTTGAGAAGTTCCCTCGCTTGCATTCATGGTTTAATAATTTCAAAAATGTCTCAATCATCAAAGAAAACCTTCCCAACAGAGAGAAAATGTGTGCTATTTTGAAGTATATCAGAGAAAGAAAAAGAGAATTGTAA 678 0.3746 MEDLKLHGFWYSPFTMRVVWTLKLKGLLYENIEEDRYNKSPQLLEYNPVHKKIPVLVHGGKPICESMIIVQYIDELWPQNPLVPHDPFERAQSRFWVAYSEQLFPAVVPLIYVDIAGDEEKEKAIENVQKLLRDVEDQCVLLVDEKKFFGGDNINMVDIAFGSMIKFLVTMEDLNELKVLEVEKFPRLHSWFNNFKNVSIIKENLPNREKMCAILKYIRERKREL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02646 225 CDD GST_C_Tau 87 218 IPR045074 GO:0004364|GO:0006749
Aip09g02646 225 CDD GST_N_Tau 4 77 - -
Aip09g02646 225 Gene3D Glutaredoxin 1 82 - -
Aip09g02646 225 Pfam Glutathione S-transferase, C-terminal domain 111 195 IPR004046 -
Aip09g02646 225 SUPERFAMILY GST C-terminal domain-like 75 221 IPR036282 -
Aip09g02646 225 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 220 - -
Aip09g02646 225 SUPERFAMILY Thioredoxin-like 3 102 IPR036249 -
Aip09g02646 225 Coils Coil 118 145 - -
Aip09g02646 225 SFLD Main.3: Omega- and Tau-like 1 221 IPR045073 -
Aip09g02646 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Aip09g02646 225 Gene3D - 83 224 - -
Aip09g02646 225 SFLD Main (cytGST) 1 221 - -
Aip09g02646 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Aip09g02646 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Aip09g02646 225 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02646 Aip-Chr9 123967071 123968689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02646 2 221 Glutathione S-transferase Gene Family AT2G29460 42.152 1.47e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02646 K00799 - gmx:547584 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g02646 09 123967071 123968689 Aip09g02646 09 123967071 123968689 ECH