Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02638 ATGGAAGATTTGAAGTTACATGGGTTTTGGTTCAGCCCCTTTACTATGAGGGTGGTATGGACCCTAAAGCTGAAGGGTATAGCATATGAGAACATAGAGGAAGACTGGGTCAACAAGAGTCCTGAACTTCTTGAATACAACCCTGTGTATAAGAAGGCTCCAGTGCTTGTTCATTCTGGAAAACCCATATGTGAATCCATGATCATTGTTGAATATATTGATGAGATATGGCCACATAATTCATTGGTTCCTCATGATCCGTATGAGAGAGCTCAAGCAAGGTTTTGGGTTAACTATGCTGATCAAATGGTTCCTGCATTATTTGCGGCACTCTACTTCAAATGCGGTGCTGGTGAAGAAAAAGAGAACCCAATAGAGAAGATCTGGGAACATCTCAAAGTTATTGAAGATCGATGCCTAGGTGATAAGAGAAAATTCTTTGGTGGGGACACTATTAATATTGTGGACATAGCTTTTGGGTCACTTTTCAAAGTTTTAGGCATTATAGAAGATGTGAATGAAGTGAAGGTCAGAGATGCTGAGAAGTTCCCTCTCTTGCATTCATGGTTCAATAATTTCAAGAATGTCACAGTGATCAAAGAAAACTTCCCTGATAGGGAGAAAATGTCAGCTACTATAAAATCTATCATAGAGAAGGCGTTGGCATCTTCCTGA 675 0.3985 MEDLKLHGFWFSPFTMRVVWTLKLKGIAYENIEEDWVNKSPELLEYNPVYKKAPVLVHSGKPICESMIIVEYIDEIWPHNSLVPHDPYERAQARFWVNYADQMVPALFAALYFKCGAGEEKENPIEKIWEHLKVIEDRCLGDKRKFFGGDTINIVDIAFGSLFKVLGIIEDVNEVKVRDAEKFPLLHSWFNNFKNVTVIKENFPDREKMSATIKSIIEKALASS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02638 224 CDD GST_N_Tau 4 77 - -
Aip09g02638 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Aip09g02638 224 Gene3D - 86 224 - -
Aip09g02638 224 Gene3D Glutaredoxin 1 85 - -
Aip09g02638 224 SFLD Main.3: Omega- and Tau-like 1 222 IPR045073 -
Aip09g02638 224 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 219 - -
Aip09g02638 224 SUPERFAMILY Thioredoxin-like 3 103 IPR036249 -
Aip09g02638 224 SFLD Glutathione Transferase (cytosolic) 1 222 IPR040079 -
Aip09g02638 224 Pfam Glutathione S-transferase, C-terminal domain 119 193 IPR004046 -
Aip09g02638 224 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Aip09g02638 224 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Aip09g02638 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 219 IPR045073 -
Aip09g02638 224 CDD GST_C_Tau 87 214 IPR045074 GO:0004364|GO:0006749
Aip09g02638 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 212 IPR010987 -
Aip09g02638 224 PRINTS Omega-class glutathione S-transferase signature 2 17 IPR005442 GO:0004364|GO:0005737
Aip09g02638 224 PRINTS Omega-class glutathione S-transferase signature 77 91 IPR005442 GO:0004364|GO:0005737
Aip09g02638 224 PRINTS Omega-class glutathione S-transferase signature 146 165 IPR005442 GO:0004364|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02638 Aip-Chr9 123560627 123561751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02638 2 216 Glutathione S-transferase Gene Family AT3G09270 46.789 3.82e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02638 K00799 - gmx:547584 315.849