Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02631 ATGGTAAGTCTTGAATTTCTTGACTTATCAAAAAACACTTTGTCTGGGGTTATTCCAAAATCATTAGAGGCACTTGTCCATCTAAAATATTTCAATGTGTTTTACAATAAGTTGACAGAAGAAATTTTCTACAGGGGACCTTTTGTAAACTTCTCATCTCAATTGTTCATGGAAAATGGAGAATTGTGTGGTGCTCAAAGTTTGCATTTTCCAAAATGCAAGGCGAAAGAAGGTAGATCTCAGAAAACAATTACATATATTATAATGGTGTTGAAATATATTTTACCAGTCATAGTAGCGACCATTCAGTCCATTCTTGCTTTGGCATTCCTATGCATCCTAAAATCTCGAAAGTACAAGCTTCTTAAGAAATCAGAAATGGATCAATCCATGGCTTGGTGGAAAAGAATTTCATACTATGAGATTCAAGAAGCAACAAACAGATTTAGTGAAAGCAATTTACTTGGCATTAGAAGCTTTGGAAAAGTGTTCAAAGGAGTTCTCTCAGGTGGGATGAATGTTGCCATAAAAGTTTTTCACTTGGAATTTGAAGAAGCATTTAGGAGTTTCGACGCTAAATGCGAAATATTATGCAATGTCCGCCATCGAAACTTAACTAAAATCATTAGCAGTTGCAGCAGCATGGATTTCAAGGCATTGGTTCTGAGCTACATGTCTAACGGGAGCTTAGAGAAGTGGCTACATTCAGAACATCATGGCTTGAGCATGATCCAGAGGTTAAACATAATGATAGATGTTGCAGAAGCAATAGAATATCCGCATCATGGTGGCTCTGTACCAATTGTGCATTGTGATTTAAAACCAAGCAATATATTGCTAGATGAATATATGGTTGACCATGTTGCAACGCCCTAA 876 0.3642 MVSLEFLDLSKNTLSGVIPKSLEALVHLKYFNVFYNKLTEEIFYRGPFVNFSSQLFMENGELCGAQSLHFPKCKAKEGRSQKTITYIIMVLKYILPVIVATIQSILALAFLCILKSRKYKLLKKSEMDQSMAWWKRISYYEIQEATNRFSESNLLGIRSFGKVFKGVLSGGMNVAIKVFHLEFEEAFRSFDAKCEILCNVRHRNLTKIISSCSSMDFKALVLSYMSNGSLEKWLHSEHHGLSMIQRLNIMIDVAEAIEYPHHGGSVPIVHCDLKPSNILLDEYMVDHVATP 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02631 291 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 1 289 - -
Aip09g02631 291 SUPERFAMILY L domain-like 3 54 - -
Aip09g02631 291 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 289 - -
Aip09g02631 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Aip09g02631 291 SUPERFAMILY Protein kinase-like (PK-like) 126 285 IPR011009 -
Aip09g02631 291 SMART serkin_6 149 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02631 291 Gene3D Phosphorylase Kinase; domain 1 111 224 - -
Aip09g02631 291 Gene3D Ribonuclease Inhibitor 1 82 IPR032675 -
Aip09g02631 291 Pfam Protein kinase domain 150 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02631 291 Gene3D Transferase(Phosphotransferase) domain 1 225 289 - -
Aip09g02631 291 ProSiteProfiles Protein kinase domain profile. 149 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02631 Aip-Chr9 123443732 123444607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02631 1 289 Receptor kinase-like Gene Family AT3G47570 34.295 7.38e-52 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip09g02631 Pkinase 5.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02631 - - aip:107616078 577.785