Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02562 ATGTGTGGGATTCTTGCAGTGTTAGGTTGTGTTGACAACTCTCAGGCCAAACGTGCTCGCATCATCGAGTTATCTCGCAGATTGAAGCATAGAGGACCTGATTGGAGTGGATTGCATTGCCATGGAGATTGTTATCTTGCTCATCAAAGGCTTGCTATTGTTGACCCCACTTCAGGGGATCAACCTCTTTATAACGAGGACAAGACTGTTGTTGTCACAGTAAATGGGGAGATCTATAACCATAAGGAACTGAGACAGAAATTGAGTTCCCACCAGTTTCGAACTGGAAGCGACTGTGAAGTCATTGCTCATCTTTACGAAGAGTATGGAGAAGAATTTATTGATATGCTGGATGGGATGTTCTCCTTTGTGCTTCTTGACACAAGAGATAAAAGCTTCATTGCTGCTCGTGATGCTATAGGCATTACCCCTCTTTACTTGGGATGGGGGCTTGATGGATCGACATGGTTTGCGTCTGAAATGAAAGCTATAAGTGATGATTGTGAGAGATTCATATCTTTTCCGCCAGGGCATATATATTCCAGCAAACAGGGAGGATTAAGAAGATGGTACAATCCACCATGGTTCACAGAGCAAATTCCATCAACACCCTATGATCCTCAGATCCTACGTCAAGCCTTTGAAAAGGCAGTGCTTAAGAGGTTGATGACTGATGTACCTTTTGGCGTTCTTTTGTCGGGAGGACTTGACTCATCACTTGTCGCTGCTGTGACCAATCGTTTTTTGGCTCAATCTGCAGCTGCACAACAGTGGGGATCGCAGTTGCATACTTTCTGTATTGGTTTAAAGGGCTCTCCAGATTTGAAATTTGCAAAAGAGGTAGCAGATTATCTTGGTACTCGACATCATGAACTTTATTTCACAGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATTTACCACATTGAAACATATGATGTAACGACTATCAGAGCAAGTACTCCAATGTTCCTTATGTCCAGAAAAATCAAATCCATGGGAGTGAAAATGGTTCTTTCGGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTATATTTCCATAAAGCACCTAATAAGGAAGAGTTTCATGAAGAGACATGTCGAAAAATCAAAGCTCTTCATCTTTATGACTGCCTGAGAGCAAATAAATCAACTTCAGCATGGGGTATAGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCAACACAGCCATGAGTATTGATCCAGAGTGGAAAATGATACGACCTGATCTCGGAAGGATAGAGAAGTGGGTATTGCGCAATGCATTTGATGACGAAACAAATCCATATTTACCGAAGGTTTGTAAAAAATTTCCGGCTCACACTGATTATTATCATCTCACATGGTGA 1380 0.4159 MCGILAVLGCVDNSQAKRARIIELSRRLKHRGPDWSGLHCHGDCYLAHQRLAIVDPTSGDQPLYNEDKTVVVTVNGEIYNHKELRQKLSSHQFRTGSDCEVIAHLYEEYGEEFIDMLDGMFSFVLLDTRDKSFIAARDAIGITPLYLGWGLDGSTWFASEMKAISDDCERFISFPPGHIYSSKQGGLRRWYNPPWFTEQIPSTPYDPQILRQAFEKAVLKRLMTDVPFGVLLSGGLDSSLVAAVTNRFLAQSAAAQQWGSQLHTFCIGLKGSPDLKFAKEVADYLGTRHHELYFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSMGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHEETCRKIKALHLYDCLRANKSTSAWGIEARVPFLDKEFINTAMSIDPEWKMIRPDLGRIEKWVLRNAFDDETNPYLPKVCKKFPAHTDYYHLTW 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02562 459 Pfam Asparagine synthase 210 361 IPR001962 GO:0004066|GO:0006529
Aip09g02562 459 CDD Asn_Synthase_B_C 211 443 IPR001962 GO:0004066|GO:0006529
Aip09g02562 459 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Aip09g02562 459 PANTHER ASPARAGINE SYNTHETASE 1 444 - -
Aip09g02562 459 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Aip09g02562 459 TIGRFAM asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 367 IPR006426 GO:0004066|GO:0006529
Aip09g02562 459 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Aip09g02562 459 Gene3D HUPs 195 452 IPR014729 -
Aip09g02562 459 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Aip09g02562 459 PIRSF Asn_synthetase_glu-h 1 361 IPR006426 GO:0004066|GO:0006529
Aip09g02562 459 PIRSF Asn_synthetase_glu-h 357 449 IPR006426 GO:0004066|GO:0006529
Aip09g02562 459 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 1 444 - -
Aip09g02562 459 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 200 443 - -
Aip09g02562 459 CDD AsnB 2 192 IPR033738 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02562 Aip-Chr9 121415345 121428828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02562 2 164 PRT Gene Family AT4G38880 26.923 4.28e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02562 K01953 - gmx:732660 849.736