Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02549 ATGAAACAACATTTCCAGAGCCTTAAGATTGCTTCTGGTGTTGAACTTGAACAGAATGCTTTGGTTGAAACTATTGAAGCAACAATTGAAGGAGTTCATCTGAGGTTTGAATCTATTCCAGTTAGACAGGACGCTTCACCAAATGTGAGGGAGGAATTGGCACAAGATCCATCGTTGCAGAAAATAATGATGGAGGGAGTATTGAGCAAGTCTTGCAGGCTTCGATGGTGTAACCAGCTCTCCACACTCGTAGAGCATCGGGCCTTCACCCTCGAAGAGGACGACACCATAATCAGAGCTCACGCTCGGTTCGGCAACAAGTGGGCCACCATAGCCCCACTCCTTTCTGCCAGAACCGACAATGCCATTAAGAACCGCTGGAACTCCACCCTCAAACGCAAGTGCGCCTCCATGGGCCCCATCGACGATCCTCACTTCGCGCAGCCACTCAAACGCTTCGTCAGAACCAGCGTCGCCGTACCCGTGTCAACGGTGGTGGTGAGATACTCGTTGCTGACGGTGATGGCGAAGACGGAGGTGGCGGGCCGTGGCCCAACTCATCCATGCCCTTCACCACTTTGA 582 0.5206 MKQHFQSLKIASGVELEQNALVETIEATIEGVHLRFESIPVRQDASPNVREELAQDPSLQKIMMEGVLSKSCRLRWCNQLSTLVEHRAFTLEEDDTIIRAHARFGNKWATIAPLLSARTDNAIKNRWNSTLKRKCASMGPIDDPHFAQPLKRFVRTSVAVPVSTVVVRYSLLTVMAKTEVAGRGPTHPCPSPL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02549 193 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 135 IPR017930 -
Aip09g02549 193 SUPERFAMILY Homeodomain-like 64 135 IPR009057 -
Aip09g02549 193 CDD SANT 88 131 IPR001005 -
Aip09g02549 193 PANTHER TRANSCRIPTION FACTOR MYB73 65 157 - -
Aip09g02549 193 SMART sant 85 133 IPR001005 -
Aip09g02549 193 ProSiteProfiles Myb-like domain profile. 89 131 IPR001005 -
Aip09g02549 193 Pfam Myb-like DNA-binding domain 88 130 IPR001005 -
Aip09g02549 193 PANTHER MYB PROTEIN-RELATED 65 157 - -
Aip09g02549 193 Gene3D - 87 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02549 Aip-Chr9 121009350 121010316 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02549 66 139 MYB Transcription Factor Family AT4G37260 78.378 1.58e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip09g02549 Myb_DNA-binding 2.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02549 K09422 - aip:107641435 211.846