Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02520 ATGAAGTCAGTGGTTGAATACTTTCAAGAGATGTATGGTTTCACTATTCAATACACTCACCTTCCTTGCCTTCAAGTAGGAAACCAAAATAAGGCAAACTACTTACCCATGGAGGCCTGTAAGATTGTGGAGGGGCAAAGGTATACAAAAAGATTGAATGAGAAGCAAATTACTGCACTGCTCAAAGTTACTTGCCAGAGACCCCGCGATCGCAAAAACGACATCTTACGGACAGTGCAACATAATTCTTATAATAAAGATCCTTATGCAAAGGAATTTGGTCTTAAAATCAGTGAAAAGCTAGCTTCTGTTGAAGCACGAATTCTTCCAGCCCCTTGGCTTAAATACCATGAAAGTGGGAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAACATGATGAACAAGGCATATGAATCTTTAATAAAAGCTTTCTCTGAATTTGGCAATCTTCCATATGGATTCCAAGCAAATACCTGGCTTGTCCCTCCATTTATTGCCGAGTCACCTTCAAACTTTCCTGCCCTTCCTGCTCAGGATGAAAGCTGGGGTTGTAATGGTGGTGGCCAAGATAGAAATGGTGAATATGAGCTTAGACAATGGGCTTCAGATTTTGCAGTATTGGCTTCTCTTCCATGCAAAACTGAAGAGGAGCGAGTGGTCCGAGATAGAAAAGCTTTCCTGAAAGCTGGGGTGGTAATGGTGGTGGCCAAGGTAGAAATGGTGAATATGAGCTTAGACAATGGGCTTTAG 756 0.4193 MKSVVEYFQEMYGFTIQYTHLPCLQVGNQNKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRKNDILRTVQHNSYNKDPYAKEFGLKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKAYESLIKAFSEFGNLPYGFQANTWLVPPFIAESPSNFPALPAQDESWGCNGGGQDRNGEYELRQWASDFAVLASLPCKTEEERVVRDRKAFLKAGVVMVVAKVEMVNMSLDNGL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02520 251 Gene3D paz domain 1 50 - -
Aip09g02520 251 Pfam Argonaute linker 2 domain 70 116 IPR032472 -
Aip09g02520 251 Pfam PAZ domain 3 60 IPR003100 GO:0005515
Aip09g02520 251 PANTHER PROTEIN ARGONAUTE 10 1 138 - -
Aip09g02520 251 CDD PAZ_argonaute_like 1 43 - -
Aip09g02520 251 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 138 - -
Aip09g02520 251 ProSiteProfiles PAZ domain profile. 3 44 IPR003100 GO:0005515
Aip09g02520 251 SUPERFAMILY PAZ domain 2 85 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02520 Aip-Chr9 119852445 119853913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02520 1 137 Eukaryotic Initiation Factors Gene Family AT5G43810 91.241 7.67e-87 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02520 K11593 - gmx:100807513 278.87