Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02512 ATGTATCAAGATAAAATTGAGCAGGAAGCTGTGAATTCTGAGGATTTAGGGAAGCAAGAATTTCAAGCAATGTTTGATGGGAACGATTTTTCACATCAGATAGCATTTGATTTCTATAACCATTATGCAAAATCTGTTGGTTTTGGTGCTAGAAAAAGTAAGACTTGGAAAAATAGCAAAGGAGAATATGTGAAGCAATTGTTTGTGTGCTCTCGTGAGGGATTTAGACCAGAGAAATATTATAATATAAAAAACAGAAAAAGAAAACCGAAATCTGAGACTCGTTGTGGTTGCCTGGCTAGGTTTGTAGTTCGTTTTATGGCTTACACTGGAAGATGGCATGTGGCTTTGTTGGTTGAATCGCACAATCATGATTGCCTTAATCCTAGGGATATGTATAATGAGATTGCCAAGCGAAGGCGTCATGTCCTAGGTGATGCTAAAGCAGCATTGCAATACCTCAAAAACAAGAAAGCTGAAGATCTTTGCCTCTATTATGAGCACATAGTTGATGCTAAAGGGAAGAACAAGTACTTGTGTCCGGTAGTAGTATTTTTCAGTGTGAATCATCACAACCAAACAATGGTATTTGAAAGTGCTCTAGTTACCGATGAGAGTAAGGAGGTCTGTGTGTGGTTATTACAACAACTATTGGCAACCATGAAGGGAAAAATACCTATATCTGTGATTACAGATGGTGCTCCATCAATGAAGTTTGCAATTGAGGTGGTATTCCCAAATGCCCATCATAGATTATGTGCTTGGCACCTCATTCGGAATACCACAAGTAATGCTGGAAACCCAAAATTTACATCTATGTTTAAGAAGCGTATGCTAAGAGATTATGAGATTAGTGTGTTTGAGCAGAAGTGGTTTGGAATGGTTGAGGAGTTTGGTGCAGCTGAAAAGAATTGA 915 0.3825 MYQDKIEQEAVNSEDLGKQEFQAMFDGNDFSHQIAFDFYNHYAKSVGFGARKSKTWKNSKGEYVKQLFVCSREGFRPEKYYNIKNRKRKPKSETRCGCLARFVVRFMAYTGRWHVALLVESHNHDCLNPRDMYNEIAKRRRHVLGDAKAALQYLKNKKAEDLCLYYEHIVDAKGKNKYLCPVVVFFSVNHHNQTMVFESALVTDESKEVCVWLLQQLLATMKGKIPISVITDGAPSMKFAIEVVFPNAHHRLCAWHLIRNTTSNAGNPKFTSMFKKRMLRDYEISVFEQKWFGMVEEFGAAEKN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02512 304 PANTHER OS02G0262500 PROTEIN 176 298 - -
Aip09g02512 304 Pfam MULE transposase domain 175 260 IPR018289 -
Aip09g02512 304 PANTHER OS02G0262500 PROTEIN 19 132 - -
Aip09g02512 304 Pfam FAR1 DNA-binding domain 37 127 IPR004330 -
Aip09g02512 304 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 176 298 IPR031052 GO:0006355
Aip09g02512 304 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 132 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02512 Aip-Chr9 119503596 119504858 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g02512 FAR1 3.1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02512 - - adu:110280242 518.079