Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02493 ATGGAACATAAAAAATCATGTCTCTTGAGTGTGTGCAAAGAATTCAAGCCACACATTCTCATGTTCTTGGCCCAGGTGGGTTGTGCCTTGGTATATTTCATCACTGAAGCTTCCTTCAATCATGGGATGAGTCCTTTTCTATATGTTACTTATCGCTATTTTGTGGCTGCTCTTGTCATGTTCCCCTTTGCATATTTTCTCGAGAGAAAACAACGACCAAAGCTCACATTTGCTTTGTTCATGGAAATTTTTGTGCTTTCCTTGGTTGGGATCAGTGTGCCAATCAACATGTATTTTGCAAGCTTGCAATACACTTCTCCAACCCTAGTTGCTTCCATGTTCAACATCGTAGCTTCCCTTACCTTCATTATTGCTGTAGCACTCAGGTACGAAGCTCTTGATATTGGAGACCCTCACGGAATAGCAAAAGTTATAGGGACATTGATATCCTTAGGAGGTGTAATGACGATGACACTGTACAAAGGACCACCGATGAGGAATTTGTGGGGTCCACTAATCCATATTCAAGGGAAAAATGGTGGCACCGAAGAGAACTGGTTAAAGGGTTCACTTCTTGCAGTTACAAGTTGTGTTTCATTATCTGTCTGGTATATTATGCAGGCATCCACTTTGAAAAGGTACCCAGCTCAACTGTCGCTAACTTCGTGGATGTGCTTTGTTGGAGCAGTGCAATCAGCTGTTTTCACAGCAATTGTACAACATGATCCTTCAGCATGGTTCATCGGCTTCAACATCGATTTGTGGTCCACGTTATATGGAGGAATTGTGGTGTCTGGATTGGTCATATATGTTCAGCTATGGTGCACTGAGAAAAAAGGGCCAGTCTTTGTCACAATGACTACCCCACTTTGTACCGTGCTTGTGGCAATTCTAGCATACTTCGTCTTTGGTGAGAAACTTTATTTGGGCAGCATCATTGGCGCATGTTTTGTCATCGTTGGTCTGTATTTGCTGTTGTGGGGTAAAGAAGGTGACCAACAAGTTCACACTATCACCAACGATACATCAAAGTGCAACGGTGAAGACCCAGTAGAATTATGCAAAATTTGA 1071 0.4239 MEHKKSCLLSVCKEFKPHILMFLAQVGCALVYFITEASFNHGMSPFLYVTYRYFVAALVMFPFAYFLERKQRPKLTFALFMEIFVLSLVGISVPINMYFASLQYTSPTLVASMFNIVASLTFIIAVALRYEALDIGDPHGIAKVIGTLISLGGVMTMTLYKGPPMRNLWGPLIHIQGKNGGTEENWLKGSLLAVTSCVSLSVWYIMQASTLKRYPAQLSLTSWMCFVGAVQSAVFTAIVQHDPSAWFIGFNIDLWSTLYGGIVVSGLVIYVQLWCTEKKGPVFVTMTTPLCTVLVAILAYFVFGEKLYLGSIIGACFVIVGLYLLLWGKEGDQQVHTITNDTSKCNGEDPVELCKI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02493 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 329 - -
Aip09g02493 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Aip09g02493 356 PANTHER WAT1-RELATED PROTEIN 15 342 - -
Aip09g02493 356 PANTHER WAT1-RELATED PROTEIN 15 342 IPR030184 GO:0016021|GO:0022857
Aip09g02493 356 Pfam EamA-like transporter family 17 155 IPR000620 GO:0016020|GO:0016021
Aip09g02493 356 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02493 Aip-Chr9 118388012 118392461 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02493 1 335 Nodulin-like Gene Family AT5G07050 40.580 9.01e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02493 - - gmx:100527877 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g02493 09 118388012 118392461 Aip09g02493 09 118388012 118392461 ECH