Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02490 ATGGTGTTAGCCCAAGTTGGCTATGCATTCTTGTATTTCATCACTGAAACTTCCTTCAACCATGGGATGAGTCCTTTCTTGTATGTAACCTACCGCCATATCGTAGCGGCTGTTATCATGTTCCCATTTGCATTCTTTCTAGAGAGAAATGAGAGACCAAAGCTCACATTTGCTCTGTTCATGGAAATTTTTGTGCTTTCCTTGGTTGGGATTTGTGTACCAATCAATATGTACTTTGCAAGCCTGCGGTACACTTCTCCAACCTTTGTTGCTTCCATTGTCAACGTCATAGCTTCCCTTACCTTCATCATTGCCGTAGTACTAAGGTTGGCCAATTAG 339 0.4218 MVLAQVGYAFLYFITETSFNHGMSPFLYVTYRHIVAAVIMFPFAFFLERNERPKLTFALFMEIFVLSLVGICVPINMYFASLRYTSPTFVASIVNVIASLTFIIAVVLRLAN 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02490 112 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 108 - -
Aip09g02490 112 Pfam EamA-like transporter family 8 108 IPR000620 GO:0016020|GO:0016021
Aip09g02490 112 PANTHER WAT1-RELATED PROTEIN 2 110 IPR030184 GO:0016021|GO:0022857
Aip09g02490 112 PANTHER WAT1-RELATED PROTEIN 2 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02490 Aip-Chr9 118218046 118222081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02490 1 110 Nodulin-like Gene Family AT5G07050 45.455 3.52e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02490 - - ahf:112778735 220.705