Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02489 ATGGATTTCAATTCGCTCGACGATTTCTTCGATTTCGATGACTTCATCCACCATTCTCCCCTTCCGCCCTCCGATTTCCTGCGTGTGAGCTCTGAAATTGACTTTTCAGGAGGTGGAGGTGGAGGTGGAGGTGGTAGTGATGTCTGTCAAGAGAAAACCAGAAAGAAGAGACATGCTAGTTCATGTTGTAAGGTAGGGACAAAGGCTGGCTGTGAAAAGTTGCGGAGGGAGAGACTCAATGAAAGGTTTTGTGACTTGAGTTTTGTTTTAGAACCGGAGAGACCTGAGCAAGCCGATAAAATGGCTATACTTGATGATGCTATCAGAGTTTAA 333 0.4535 MDFNSLDDFFDFDDFIHHSPLPPSDFLRVSSEIDFSGGGGGGGGGSDVCQEKTRKKRHASSCCKVGTKAGCEKLRRERLNERFCDLSFVLEPERPEQADKMAILDDAIRV 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02489 110 PANTHER BHLH TRANSCRIPTION FACTOR 46 110 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Aip09g02489 110 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 62 109 IPR036638 GO:0046983
Aip09g02489 110 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 63 110 IPR011598 GO:0046983
Aip09g02489 110 Pfam Helix-loop-helix DNA-binding domain 68 109 IPR011598 GO:0046983
Aip09g02489 110 Gene3D - 66 110 IPR036638 GO:0046983
Aip09g02489 110 PANTHER TRANSCRIPTION FACTOR BHLH104 46 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02489 Aip-Chr9 118207088 118208746 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02489 33 110 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23210 50.000 9.03e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02489 - - aip:107617845 168.703