Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02472 ATGGAGGACCACCACAGGGGGAAACAAGGAAAGGAGGAGAAGGGAAAGGAAGAGGTCAAGTTCCGAGGTGTGCGGCGGCGGCCATGGGGAAAGTATGCTGCTGAGATAAGGGATCCGTCCAAGCAAGGGACAAGGTTGTGGCTGGGGACATTTGACACAGCTGAGGACGCGGCTAGAGCTTATGATCGTGCAGCCTTCAATCTTAGGGGTCACCTTGCAATTCTCAATTTCCCAAATGAGTATTATTCTCAAATAAGGGGTTCACCACCATATCCACCATATTTAGCATCACCCTCTTCTTCTTCTTCTTCTTATTCACCTCAATGCCATGCTAGTGGAAGTTCTAATCCTGGTTCCAACCATGGTCCTCCTTTTGAGATTGAGTACTATGATAATAAACTGTTGGAGGATCTTCTTGAGTCTGAAGAGCTGAACAAGAAAAAGAAGGGAAAATGA 456 0.4671 MEDHHRGKQGKEEKGKEEVKFRGVRRRPWGKYAAEIRDPSKQGTRLWLGTFDTAEDAARAYDRAAFNLRGHLAILNFPNEYYSQIRGSPPYPPYLASPSSSSSSYSPQCHASGSSNPGSNHGPPFEIEYYDNKLLEDLLESEELNKKKKGK 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02472 151 Pfam AP2 domain 20 71 IPR001471 GO:0003700|GO:0006355
Aip09g02472 151 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Aip09g02472 151 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Aip09g02472 151 PANTHER DNA-BINDING DOMAIN 1 143 IPR044808 GO:0003700|GO:0009873
Aip09g02472 151 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Aip09g02472 151 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Aip09g02472 151 MobiDBLite consensus disorder prediction 88 126 - -
Aip09g02472 151 SUPERFAMILY DNA-binding domain 20 79 IPR016177 GO:0003677
Aip09g02472 151 MobiDBLite consensus disorder prediction 97 121 - -
Aip09g02472 151 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Aip09g02472 151 MobiDBLite consensus disorder prediction 1 22 - -
Aip09g02472 151 PANTHER ETHYLENE RESPONSE FACTOR 1 143 - -
Aip09g02472 151 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02472 Aip-Chr9 117585382 117586171 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02472 18 143 AP2-EREBP Transcription Factor Family AT3G23230 61.111 1.19e-46 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aip09g02472 AP2 2.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02472 - - gmx:100776376 142.124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g02472 09 117585382 117586171 Aip09g02472 09 117585382 117586171 ECH