Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02459 ATGGAACGTGGGGTTGTGGATGGCATAATCAACAGGCTTCTAGAAATAAGAGGCAAACCGGGGAAGCAAGTGCAGCTTTCTGAGGCTGAGATCAGGCAGCTATGCCTTGTCTCCAAGGACATCTTCTTGAGACAACCTAACCTTTTGGAACTTGATGCACCAATCAAGATCTGTGGGGATATCCATGGTCAATATTATGATCTTCTGAGAATCTTTGAAAATGGTGGCTTCCCACCTCGTTCCAATTACTTATTCTTAGGAGACTACGTTGATCGCGGAAACCAAAGTCTTGAGACAATATCTCTTCTTCTAGCATACAAAATCAAATACCCTCAGAACATTTTCCTCCTCAGGGGAAACCATGAATGCGCTTCCATAAACCGTATCTACGGTTTCTACGACGAATGCAAGAGAAGATACAGTGTGAAGCTGTGGAAAACATTCACGGATTGCTTCAACTGCTTGCCCGTGGCGGCTCTTATCGACGACAAGATACTCTGCATGCATGGTGGACTCTCCCCTGAATTGCACAACTTGAACCGGATAAGGACTTTGCGCCGTCCGGTCCAAGTGCCCGACAGTGGTCTGCTATGTGATCTTCTCTGGTCTGATCCCTGCGGAGACATTCAAGGCTGGGGAGGAAGCGAACGCGGAGTTTCGTGTACTTTCGGCCCTGATAGGGTCACTGAGTTTCTGAGGAAGCATGATCTTGATTTGATCTGTAGAGCACATCAGGTTTCGTATTCTATATGA 753 0.4675 MERGVVDGIINRLLEIRGKPGKQVQLSEAEIRQLCLVSKDIFLRQPNLLELDAPIKICGDIHGQYYDLLRIFENGGFPPRSNYLFLGDYVDRGNQSLETISLLLAYKIKYPQNIFLLRGNHECASINRIYGFYDECKRRYSVKLWKTFTDCFNCLPVAALIDDKILCMHGGLSPELHNLNRIRTLRRPVQVPDSGLLCDLLWSDPCGDIQGWGGSERGVSCTFGPDRVTEFLRKHDLDLICRAHQVSYSI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02459 250 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Aip09g02459 250 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 246 - -
Aip09g02459 250 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 246 - -
Aip09g02459 250 SUPERFAMILY Metallo-dependent phosphatases 19 247 IPR029052 -
Aip09g02459 250 SMART pp2a_7 26 250 IPR006186 GO:0016787
Aip09g02459 250 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Aip09g02459 250 Pfam Serine-threonine protein phosphatase N-terminal domain 6 51 IPR031675 -
Aip09g02459 250 Gene3D - 10 249 IPR029052 -
Aip09g02459 250 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Aip09g02459 250 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Aip09g02459 250 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Aip09g02459 250 PRINTS Serine/threonine phosphatase family signature 236 250 IPR006186 GO:0016787
Aip09g02459 250 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Aip09g02459 250 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02459 Aip-Chr9 116823730 116825899 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02459 33 242 Calmodulin-binding Proteins AT5G63870 32.000 1.25e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02459 K06269 - gmx:100791655 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g02459 09 116823730 116825899 Aip09g02459 09 116823730 116825899 ECH