Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02449 ATGGGAATGGAAGATGTTGAGACAACTGGTGTAGCATTGAAGCAGATGCGGGAAAATGGCAACACGTCTGTTGAAGGAATTTCTTTAACTGTGGATGATATTCTACAGATGGAGTTTAATGATCCTAAGCAGGTAGCACGTTTGTACGAGGAGTACAGCCGTGTGAGAAGTTTTGGTAGCCGACAAGAGAAGAAAATAAGAAATAAGAAAGGTGAATTTGTGCGATTCACTTATCTGTGCAACCGTGAAGGCTTTAGAGATAAGAAATGGCTTCAGATGCATCATCTTAAACGGGAGCATAAGGTTGTTATTAGGTGCAGGTGTCCAGCTGAGATGCGGATAAAACCAAGAGATAACACCGGCAAATGGTATGTGTCACGTTTTGTGGACAATCACAACCATGATCTTCCACCTGCCAAGTTTGTTGAGTACTTGCCTTCACACCGTAAAATTTCAGATGTTGACATAGCCCATATGGATAGCATGAGACAAGTTGGGATATCAGTTCCAAAAATATATGAGTCGATAGCTGCACAGGCTGGTGGTTTTAATCAAGTTTCATTTACTAAGCGAGACATGTACAACGAAGTTAGGCGGCAGCGAGCCCTTCAAAATGGCGATGTGAATGCTGCCTTGAGGGTGTTAGCCAATGCATCAAGGGTTGATGATAGAATGTTTTGGCGGACAACCTCCCGGTGTGAGTCATTGCATGCAAAGCTTGGTCGCTTTGTCAAGAAGAGATACGGTGTCCTTGAGTTTGTCACAAACTTCCAGCGATGTGTTGATTTCCTCAGAGACAATAAGGACGAGCTTGAGTTTCGTTCATCGTATGGCACTGTCATTCAGACTCAGTTTCCAGAGTTAGAAAAGTCAGGTGCGCTGTGTTATACAACATAA 897 0.4326 MGMEDVETTGVALKQMRENGNTSVEGISLTVDDILQMEFNDPKQVARLYEEYSRVRSFGSRQEKKIRNKKGEFVRFTYLCNREGFRDKKWLQMHHLKREHKVVIRCRCPAEMRIKPRDNTGKWYVSRFVDNHNHDLPPAKFVEYLPSHRKISDVDIAHMDSMRQVGISVPKIYESIAAQAGGFNQVSFTKRDMYNEVRRQRALQNGDVNAALRVLANASRVDDRMFWRTTSRCESLHAKLGRFVKKRYGVLEFVTNFQRCVDFLRDNKDELEFRSSYGTVIQTQFPELEKSGALCYTT 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02449 298 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 26 214 - -
Aip09g02449 298 Pfam FAR1 DNA-binding domain 48 136 IPR004330 -
Aip09g02449 298 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 214 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02449 Aip-Chr9 116179913 116181383 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g02449 FAR1 2.8e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02449 - - adu:107486709 342.043