Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02439 ATGCCTAATGGATACTCCAAGGTGACTTGGGTTGAACATGTAGAGATCGAAGACAAAACTCTGGTTCATCGTCTTTTCCGGAATCTTGTTTATAATGGAATGGCATTTGGAGCTCAGAGATGGCTTGCCGTGCTGCAGAGGATGTGTGAAAGATTGGCTTGTTTAACGGTAACAGAAAATTCCACTAGGGACCTTGGAGGAGAAGGGAGTGGTGTTCTTCTCTTAGGAGTGGGACTTGAATGCCCTCTCATCAAAGAAAGGCTCTCATTATTTACTCCTGCTGCTGTTGTTGCTGAATGTGCAGATATTGCTGGGACTCCTCCTTATGGATATTGCCAGAGTGCTGTTTCTGGGCTGAATAGAGGTCTTGCTGCAAATGAGGATGATTTGAGAAAGGCGGATGTTGTGGCTAAGGAACTCGAAACTGCCGGAGGACTAGTTGATCTCTTGGCTGACCTCGATAAATTGCAAGGAAGATGGAGATTGATATATAGCAGTGCATTCTCATCTCGTACTCTAGGCGGCAGCCGGCCTGGACCTCCCACCGAAAACTCCTTCTTGTAA 564 0.4645 MPNGYSKVTWVEHVEIEDKTLVHRLFRNLVYNGMAFGAQRWLAVLQRMCERLACLTVTENSTRDLGGEGSGVLLLGVGLECPLIKERLSLFTPAAVVAECADIAGTPPYGYCQSAVSGLNRGLAANEDDLRKADVVAKELETAGGLVDLLADLDKLQGRWRLIYSSAFSSRTLGGSRPGPPTENSFL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02439 187 ProSiteProfiles START domain profile. 1 54 IPR002913 GO:0008289
Aip09g02439 187 Pfam PAP_fibrillin 114 173 IPR006843 -
Aip09g02439 187 Pfam START domain 2 51 IPR002913 GO:0008289
Aip09g02439 187 PANTHER PLASTID-LIPID-ASSOCIATED PROTEIN 6, CHLOROPLASTIC 114 184 - -
Aip09g02439 187 PANTHER - 114 184 IPR039633 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02439 Aip-Chr9 116009065 116010772 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02439 1 67 Homeobox Transcription Factor Family AT1G73360 65.672 1.38e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02439 - K09338 gmx:100809075 124.02