Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02436 ATGAATAGAAGAAAGAAAGACTCAGCAAAGAAAAGAAAGTTTGCTGATTTCCAAAAGGAAGAACATGAAGCAAGAAATAAGGTTCCAAATTCTGATAAACTAAGTTTGAAGCGAATAGATAGCGCGATGTTTGAAGTTCATGTAAAGCAAAGGCGGAGCAAGGAAGAAAGGTCTGCATTGGCTAAAGCAGGAAGGGAGGATAGAGGAAAATACCTTCCTAGAAAAGCCGCAAATCAGAAAAAGGAAGTTATGGGTCAGGAATTTTCTCATGAAGGGGTTAATAGCGAGCATACATCATATGATCAGTATGAGCAGGAGGAAGAAAAACATGAGGAAGTTGACGTGGATTATATGGATGAGGATGACACAAATGTGGAACCAATGTTCGATTATCACGACTTCGATGAAGGGTCTAACATTGACTCACTCGAAGACATTGAGATGATTGAATTTTGGAACATCAGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCAACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTTGGAAGAACAGGACTAGGAAGAGTCGTGCGGGTGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACTGCCAAATAATTACGGCATCGGAAACCTTAAGAGAAAACCTACACCGGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCATGTAGATGCACCTAGTGGTCATTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGCTTTTGGATCCTTGGTTGACTGGATTGCTCCCTGGGCATAGATTCATGTCCGAGGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAATGTTGGGTAG 888 0.4043 MNRRKKDSAKKRKFADFQKEEHEARNKVPNSDKLSLKRIDSAMFEVHVKQRRSKEERSALAKAGREDRGKYLPRKAANQKKEVMGQEFSHEGVNSEHTSYDQYEQEEEKHEEVDVDYMDEDDTNVEPMFDYHDFDEGSNIDSLEDIEMIEFWNIRDEDVCHFHFSDVNIAFEFYNRYARTRGFSAWKNRTRKSRAGALKLKNFVCHREGFRLPNNYGIGNLKRKPTPETRCGCSAMMEIHVDAPSGHWFISYFSDEHNHPLLDPWLTGLLPGHRFMSEADIGHMVNMKKGGINVG 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02436 295 MobiDBLite consensus disorder prediction 11 34 - -
Aip09g02436 295 Pfam FAR1 DNA-binding domain 172 262 IPR004330 -
Aip09g02436 295 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 102 271 - -
Aip09g02436 295 MobiDBLite consensus disorder prediction 48 87 - -
Aip09g02436 295 MobiDBLite consensus disorder prediction 48 100 - -
Aip09g02436 295 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 102 271 - -
Aip09g02436 295 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02436 Aip-Chr9 115830016 115835343 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g02436 FAR1 1.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02436 - - aip:107619151 442.58