Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02429 ATGGTGGTCGGAGACAGAGCTGCTAGTGCTTTCAAGAGCCACAGTCAGGCTGAGAAGTGGCGCAGTGACCGGATCAGTGCACAGCTTACAAGTCTAAGGAAACTAATTCCAAAATCTGATAAGCATTTAGATCCAGAGGCAGAAGTAATAGCTCTATCGCCAAAGTCATTGATGGCGAAGAACCGTTTCATGTGCGAGATATGCAAAAAAGAGTTCCAGAGGGACCAGAACCTGCAGTTGCACCGGCGAGGGCACAACCTGCCGTGGAAGATTCAGCAGAGGGAAAAAGGGACCAGATCCTACAGTTGCACCGGCGAGGGGCCGTGGAAGCTTCGGCAGAGGGAGAAGGAGGTGTTGGTGGTGGGCACGGGTTGA 375 0.5253 MVVGDRAASAFKSHSQAEKWRSDRISAQLTSLRKLIPKSDKHLDPEAEVIALSPKSLMAKNRFMCEICKKEFQRDQNLQLHRRGHNLPWKIQQREKGTRSYSCTGEGPWKLRQREKEVLVVGTG 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02429 124 SUPERFAMILY beta-beta-alpha zinc fingers 60 86 IPR036236 -
Aip09g02429 124 Gene3D Classic Zinc Finger 39 114 - -
Aip09g02429 124 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 44 96 - -
Aip09g02429 124 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 85 IPR013087 -
Aip09g02429 124 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
Aip09g02429 124 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 44 96 - -
Aip09g02429 124 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 10 44 IPR036638 GO:0046983
Aip09g02429 124 Pfam Zinc-finger double-stranded RNA-binding 63 85 IPR022755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02429 Aip-Chr9 115452013 115453553 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02429 42 103 IDZ Gene Family AT5G44160 73.846 3.46e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip09g02429 zf-C2H2_jaz 5.1e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02429 K25870 - adu:107461721 105.531