Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02416 ATGGGGTTTGCTGTCCATCTGGGTCAGATCTCCTCTCTGGTGGTGGTTGATGTAGCTCTCTGGATTATGATCTCAGGTCGTCAAAGTTGGAAATTGAAAAGGCGAGTTGAACATAGCCGATTAGCTGATTCGGTTAAAGAATGCACAAAAGCATTAGATCTGAATCCAGCGTACATTAAAGCTTTAGTAAGAAGAGGAGAAGCTCATGAAAAGCTTGAACATTTTGAAGAAGCCATTGCTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAAGGCCATCAGGCGACTTGAGCCGCTTGCTGTAGAAAATCGGGAAATGATGAAGAGATGA 348 0.4195 MGFAVHLGQISSLVVVDVALWIMISGRQSWKLKRRVEHSRLADSVKECTKALDLNPAYIKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARKAIRRLEPLAVENREMMKR 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02416 115 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 42 114 - -
Aip09g02416 115 SMART tpr_5 59 92 IPR019734 GO:0005515
Aip09g02416 115 ProSiteProfiles TPR repeat profile. 59 92 IPR019734 GO:0005515
Aip09g02416 115 SUPERFAMILY TPR-like 40 102 IPR011990 GO:0005515
Aip09g02416 115 Gene3D Tetratricopeptide repeat domain 29 115 IPR011990 GO:0005515
Aip09g02416 115 Pfam Tetratricopeptide repeat 60 92 IPR013105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02416 Aip-Chr9 114813376 114814883 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02416 46 103 Calmodulin-binding Proteins AT3G25230 43.103 3.53e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02416 K24926 - aip:110270710 135.961