Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02408 ATGACAAAGAGAGTAGACAAGGCAACGATAAGCGGCAACGGCGGCGTGTTACCAGCATTCCGCTTGTCATCTTTGGCCTTAGACAAGATATGGAAGGGGCTGCAGCGACGGAGTAGCATTTGGTGGCCACAAATCTCATCTCGTCGAGCATCAAAGTGGCGGAGAAGACCTTCGTTTCAGTCGGTATGGGAAGAGATTCGGGTTAGGTGGTATGGGCAGATGGATCGGAAGCTTGTGAACCTTATGTTCGGaccgtcaagctctctccgcctccccaccgcaacccactcctccgatggcttccacTTCTATTTTGTAGCAGTGAACATAACATTTCGAAACACAGCAGGGCCAAGCAAGCACCAAGCAGTTGCCCTTAGAAGCGGAGCCGACTTATCTGCCTTCTACATGTGCAGCTTCGAGGGCTACCAAGACACACTCTACGCCCATTCCATGCGTCAATTCTACTGCGACTGCCACATTTATGGCACCGTTGATTTTATTTTCGGTAACGCCGCCGTAGTCTTCCGAAATTGCAACATCTTCTCCCGCCTCCCTATGGCCGGCCAATTCAACTCAATTACCGCACAAGGCAGAACCGATCCCAACCAAAATACCGGAATCTCCATACACAACGCAACGATTCGACCCGCTGAAGATTTGGCCCCTCGCGTTGGTGTTGTGAAAACGTACCTTGGTAGGCCGTGGAAGCAATACTCGAGGACGGTTTTATCGAAAAATATAAAAAAAAAAACATTCATTTAA 765 0.4523 MTKRVDKATISGNGGVLPAFRLSSLALDKIWKGLQRRSSIWWPQISSRRASKWRRRPSFQSVWEEIRVRWYGQMDRKLVNLMFGPSSSLRLPTATHSSDGFHFYFVAVNITFRNTAGPSKHQAVALRSGADLSAFYMCSFEGYQDTLYAHSMRQFYCDCHIYGTVDFIFGNAAVVFRNCNIFSRLPMAGQFNSITAQGRTDPNQNTGISIHNATIRPAEDLAPRVGVVKTYLGRPWKQYSRTVLSKNIKKKTFI 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02408 254 ProSitePatterns Pectinesterase signature 2. 161 170 IPR033131 -
Aip09g02408 254 Gene3D - 79 253 IPR012334 -
Aip09g02408 254 Pfam Pectinesterase 93 246 IPR000070 GO:0030599|GO:0042545
Aip09g02408 254 PANTHER PECTINESTERASE 105 245 - -
Aip09g02408 254 PANTHER PECTINESTERASE 105 245 - -
Aip09g02408 254 SUPERFAMILY Pectin lyase-like 104 248 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02408 Aip-Chr9 114605416 114606626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02408 105 244 Carbohydrate Esterase AT4G02330 77.143 6.78e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02408 K01051 - gmx:100813051 249.98