Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02406 ATGGAGTTGTTTCCTTCTTCTCCAAAAAAATATGATGTTTTTGTGAGCTACAAAGGCGGGGACACCCAAATCAACTTCATTAATAACCTAAACTCAGCACTTACTCAAGCAGGCATTAAAATATACATTGATAGTTACCTCCGAACCGGAGATGCGATATGGCCGCCGCTTCGCGAAGCCATCCACAACTCCAGTGTAGCCTTTGTGATCTTCACAAAGGGctacgcgtcttccaaatggtgtttggaagaacttgggaagatactcgaatgccgaagaaccgagggaatgggggttatacctctgttttacaatgttgatccttgtgatgtacggaatcagagtggaacatacggagaagcatttgcaaaacatgaacGGTGCTTGTTGTTGGATGAAAAAGACAACATCATCAACAAAGAAGATGTTCAGAAGAAACTGTCTCAATGGAAAGGTGCACTCACTGAAGCTGCTAATATATCTGGATGGTACACTCGAAGCAATAAGAACCAATCTCAAGTCATTGAGAAAATGGTCGGAGATGTATTGGAAATGCTGGAGTTAAGGTTCCCTAAGGAACTAAAATCCAAAGACCTTGTTCGATTTGACAAAATCCTCAAAGAGATGCAATTGTTGCTGTCAAAAAACAGAGGTAATTTGTTAGTTGGAAATGTTCAAGTAATCGGAATTTGCGGTATGAGCGGGATAGGTAAAACAACCATCGCAAAAATCCTTTTTTCCCAACACTTTCCCTTATATGACAGTGTTTGCTTCATAGAAAATGTGAAAGAAGCATCACAAAACATAGAATCTTTAAAAGAGAAGATGGTTTCTGAGCTTCTAAAGGATGAAAATCAAAACTCTAAAGAATCCACATTATTAATTGGAAAGAGGCTTAGTAACAAAAAGATTTTTGTTGTGCTTGATGATGTGGATAATTTAGAACAAGTAGAAGTATTGTGTGAAGAATTTAGATATGCAAGTCCAGAGAGTAAACTCATTATAACTACAAGAAATAAGGATTTGCTTAGGGGAATAATGGTTGATGAATATGATGTTTATGAGATTAAGACATGGAGCTTTGAAGAATCTCTAGAGCTTTTTTGCTCGAGTGCCTTCAAGAGCAAGCATCCGAAGAAAGGATACGAGGATATTGCGAAAAGGGCGGTTGATTATGCCGGTGGTGTTCCGTTGGCTTTGAAGGTTTTGGGTTCGAGTCTTGGTGATAGAAGCATTGAATTTTGGGAGAGGGAATTGGATAAGGTCGAGAACTATTCTTGTGACCGGattcaaaaggtgttgcgagtgagctatgaaggactacatgatattgagaagaaaatatttctagacattgcattctttttcaaagacgagagtaaagattttgtggaaagggttttgaatgcttgcggtttctatgctaccggtggtttgaaggtccttgaagataaagctctcataaccatttcagatggcaacaaaataaaaatgcatggtttggtgcaagatttggctttgagtattgttcgtgaaGGCATCGAAGATCATGGAAAACGTAGCCGGTTGAGGGACATTGCTGAAATTTCTAGTGTACTTGAATGCAAAAATAAGGGGAGTGATGCTGTTGAAGGTATAAAGTTAGATTTGTCACAAATTGACGATCTACACTTAAATGCTAACGCATTTAGCATCATGACTGAACTAAGATTTTTGAAATTGCATACTCCCTGTGGTAAGATTTCGGGTAACATGGACTATCCTATTGTCCTTAATCAATTTTCTTCCAAGTTGAGGTATCTTGAGTGGAACGGATACCGCTTAAAGTCTCTTCCAGAAAGTTTCTGTGCTACGAAGCTTGTTGAGATTCGAATGGTCCAGAGCCACATAACAGAACTTTGGCATGGGGTTAAGAATCTTGTGAATTTAGAGGGAATTGATCTAAGTGAGTGCAAATATTTGGAGAATCTTCCAGATCTGTCCAAGGCATCTAAACTCAAATGGTTGAATCTTTCTGATTGTGAGAGCTTGGTTGAGCTTCATCCATCTGTTTTGTCTCTTGACACGCTTGAAACTTTGATCCTCAATGGCTGCAAGAAACTCAAGAGTTTAAAGAGCGAGAAGCATTTCAGATCTCTCAAGAAAGTCAGTGTGGAGGGATGCACCAGTCTGAAGGAGTTTGCGCTGTCCTCCGATAAGATGGAGAGCTTGGAACTGAAGAATGCAGGAATAGAACAACTGCACTCGTCGATAGGGCTTTCCAGCAACCTTAGATATCTGAATCTAGAAGGTTTGAGATTCCAGAATGTTCCAAATGAGTTATCATCCCTTACAAGCCTTGTGGAACTAAGAATTTCTGATTGCAAAGAACTAGTTCTTGAAAAACAGAAATTGCAAGCATTGTTTGATGGTCTAAGATCTCTAAGATTGCTGCATTTGAAGGATTGTTCAAACTTGCTTGAACTTCCTGAAAACATTAGCGTGTTGTCCAAGTTATGTGAGCTGAGACTAGACGGAAGCGGCGTAGAAACGTTGCCTGAAAGCATCAAGCATCTTTCGCTGCTCGAAATTCTTTCCTTAGAGAATTGCTTGAACCTCAGGCAACTGCCAGAGCTTCCAACAACCATCAAAGAATTAACCGCCGCTAACTGCAAATCGTTGGTGACAGTTCCCACTTTGAAGACTCTTGCAACCATGATGACAGGGCGAGAGAAGTTCGTGTCGTTTGAGAATTGCACGAAACTAGACGGATCTTCGCTCTGCCGGATAGCGGAAGGTGCAGAGTTATCATCAATGAATGCCGCTTTTCAAAATGTGTTTGTAAGAAGCAAAGGCGCCAGCGGTGCCAGCTGTCACAACTACAACTTTGTTAAGGTGTGTTCACCAGGAAGCAGAGTCCCGGAGCAGTTCACATACCGAAGCAGAGAGTCCTCTTTCAAAGTCAAAATTCCTTCACACTCCAACATTTTGGGAATGGTTTTGTCTGTGCTTATTTCGCCAAGCGAAGGAATCAAGAACCATGGTGCCAGAATATTTTGTCAGTGCTATGATGCTGATGGTAGAAAGGTGGGGTATGCTACTAGGTGGTTCCATGAAGCTACCAAGGATTTGAAAGGTGATCATGTTTTTGTTTGGTATGATGCACTTCATTTTGATAGCATTGTTAAAAGCCTCAAAGAACAAGAAATTATTTTTGAGTTCTTTGTTGCAAATGAATTGGGGGAACGTGATGTGTTAAATGTTCTTCCAAAAGAGTGTGGGGTGCGCTTGATTTTTGACTCAGAGTTGCACAATCTTTTGAGGAATTTGCAGTTGGATTTTGAGTCCAAGTGGGAGTTAGGGTTGCGGTTAGGTTCGGAGTTGGGGTTGGAGTTGGGATCAGAGCTAAGGTTGGAGTTGGAGTCACAACAACATAGAGCAATCTGA 3426 0.3602 MELFPSSPKKYDVFVSYKGGDTQINFINNLNSALTQAGIKIYIDSYLRTGDAIWPPLREAIHNSSVAFVIFTKGYASSKWCLEELGKILECRRTEGMGVIPLFYNVDPCDVRNQSGTYGEAFAKHERCLLLDEKDNIINKEDVQKKLSQWKGALTEAANISGWYTRSNKNQSQVIEKMVGDVLEMLELRFPKELKSKDLVRFDKILKEMQLLLSKNRGNLLVGNVQVIGICGMSGIGKTTIAKILFSQHFPLYDSVCFIENVKEASQNIESLKEKMVSELLKDENQNSKESTLLIGKRLSNKKIFVVLDDVDNLEQVEVLCEEFRYASPESKLIITTRNKDLLRGIMVDEYDVYEIKTWSFEESLELFCSSAFKSKHPKKGYEDIAKRAVDYAGGVPLALKVLGSSLGDRSIEFWERELDKVENYSCDRIQKVLRVSYEGLHDIEKKIFLDIAFFFKDESKDFVERVLNACGFYATGGLKVLEDKALITISDGNKIKMHGLVQDLALSIVREGIEDHGKRSRLRDIAEISSVLECKNKGSDAVEGIKLDLSQIDDLHLNANAFSIMTELRFLKLHTPCGKISGNMDYPIVLNQFSSKLRYLEWNGYRLKSLPESFCATKLVEIRMVQSHITELWHGVKNLVNLEGIDLSECKYLENLPDLSKASKLKWLNLSDCESLVELHPSVLSLDTLETLILNGCKKLKSLKSEKHFRSLKKVSVEGCTSLKEFALSSDKMESLELKNAGIEQLHSSIGLSSNLRYLNLEGLRFQNVPNELSSLTSLVELRISDCKELVLEKQKLQALFDGLRSLRLLHLKDCSNLLELPENISVLSKLCELRLDGSGVETLPESIKHLSLLEILSLENCLNLRQLPELPTTIKELTAANCKSLVTVPTLKTLATMMTGREKFVSFENCTKLDGSSLCRIAEGAELSSMNAAFQNVFVRSKGASGASCHNYNFVKVCSPGSRVPEQFTYRSRESSFKVKIPSHSNILGMVLSVLISPSEGIKNHGARIFCQCYDADGRKVGYATRWFHEATKDLKGDHVFVWYDALHFDSIVKSLKEQEIIFEFFVANELGERDVLNVLPKECGVRLIFDSELHNLLRNLQLDFESKWELGLRLGSELGLELGSELRLELESQQHRAI 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02406 1141 Coils Coil 262 282 - -
Aip09g02406 1141 SMART till_3 10 160 IPR000157 GO:0007165
Aip09g02406 1141 Pfam C-JID domain 962 1096 IPR045344 -
Aip09g02406 1141 PRINTS Disease resistance protein signature 227 242 - -
Aip09g02406 1141 PRINTS Disease resistance protein signature 298 312 - -
Aip09g02406 1141 PRINTS Disease resistance protein signature 393 407 - -
Aip09g02406 1141 PRINTS Disease resistance protein signature 638 654 - -
Aip09g02406 1141 ProSiteProfiles TIR domain profile. 9 186 IPR000157 GO:0007165
Aip09g02406 1141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 452 IPR027417 -
Aip09g02406 1141 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 972 IPR044974 GO:0006952
Aip09g02406 1141 SUPERFAMILY L domain-like 497 888 - -
Aip09g02406 1141 Gene3D Ribonuclease Inhibitor 526 733 IPR032675 -
Aip09g02406 1141 Gene3D Ribonuclease Inhibitor 734 925 IPR032675 -
Aip09g02406 1141 Pfam NB-ARC domain 220 439 IPR002182 GO:0043531
Aip09g02406 1141 Pfam TIR domain 10 200 IPR000157 GO:0007165
Aip09g02406 1141 PANTHER NB-ARC DOMAIN PROTEIN 12 972 - -
Aip09g02406 1141 Gene3D - 188 353 IPR027417 -
Aip09g02406 1141 Gene3D - 360 442 IPR042197 -
Aip09g02406 1141 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 163 IPR035897 -
Aip09g02406 1141 Gene3D - 5 187 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02406 Aip-Chr9 114592832 114598242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02406 754 891 WRKY Transcription Factor Family AT4G12020 33.099 1.35e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02406 - - ahf:112709325 2177.13